G93718



Basic Information


Item Value
gene id G93718
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25809544 ~ 25809853 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU116944
cttgatccaagtcttcaaaatcatgaagggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggttgaagctgaaagtttgggaacatttaaaaatagactggataggatccttggatcacttagatattaatggacaccaaacgagcacgatgggtcgaatggcctcctctcgtttgtaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU116944 True 310 lncRNA 0.46 1 25809544 25809853

Neighbor


gene id symbol gene type direction distance location
AMCG00017855 NA coding downstream 442994 25346820 ~ 25366550 (-)
AMCG00017852 NA coding downstream 585263 25115938 ~ 25224281 (-)
AMCG00017850 NA coding downstream 704402 25100833 ~ 25105142 (-)
AMCG00017851 NA coding downstream 708913 25095198 ~ 25100631 (-)
AMCG00017846 NA coding downstream 729113 25075605 ~ 25080431 (-)
AMCG00017862 dnah6 coding upstream 13123 25822976 ~ 25923225 (-)
AMCG00017867 LOC107754176 coding upstream 223262 26033115 ~ 26049947 (-)
AMCG00017869 NA coding upstream 266875 26076728 ~ 26082767 (-)
AMCG00017870 NA coding upstream 286587 26096440 ~ 26097928 (-)
AMCG00017872 atp8a1,LOC107550857 coding upstream 302260 26112113 ~ 26193833 (-)
G93689 NA non-coding downstream 291944 25517286 ~ 25517600 (-)
G93660 NA non-coding downstream 428506 25372933 ~ 25381038 (-)
G93641 NA non-coding downstream 698454 25110890 ~ 25111090 (-)
G93639 NA non-coding downstream 702462 25106802 ~ 25107082 (-)
G93591 NA non-coding downstream 859296 24949968 ~ 24950248 (-)
G93802 NA non-coding upstream 448243 26258096 ~ 26258367 (-)
G93816 NA non-coding upstream 543664 26353517 ~ 26353724 (-)
G93843 NA non-coding upstream 689061 26498914 ~ 26499177 (-)
G94008 NA non-coding upstream 1952833 27762686 ~ 27767331 (-)
G94012 NA non-coding upstream 1969184 27779037 ~ 27784050 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 791332 24997544 ~ 25018212 (-)
AMCG00017839 NA other downstream 860408 24946095 ~ 24949136 (-)
AMCG00017819 NA other downstream 1538949 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 2487590 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 5450919 20302000 ~ 20358625 (-)
AMCG00017861 LOC103354863 other upstream 135288 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 202635 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 294173 26104026 ~ 26107805 (-)
G93796 NA other upstream 299207 26109060 ~ 26110074 (-)
AMCG00017902 NA other upstream 2028398 27838251 ~ 27839790 (-)

Expression



Co-expression Network