G93842


Basic Information

Item Value
gene id G93842
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 26498712 ~ 26499170 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117087
ttcttgaagtgtggagcccagaactgtacacagtatccagatgagctctaactagcgcattgtacagtctgaacatcactgcccttgttttaaattctacacttttgacaatataccctaacattctgtttgcctttacttcatctagttacttcatctagttctattcctcccatagtgtaattatagtggacatttgtgttacctgcatgtaataccttgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctttgaatagcctgtgctgccaagattgtatctgctgagccacctattttagtatcatctgcaattttgacaagtttgctaactatcccagagtccagatcattaatatagattagaaaaagcacaggccctagtactgatccctgtggaactccactaacaacctcactccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117087 True 459 lncRNA 0.41 1 26498712 26499170

Neighbor

gene id symbol gene type direction distance location
AMCG00017873 gnpda2,LOC106521223 coding upstream 41082 26453244 ~ 26457630 (+)
AMCG00017871 grxcr1,LOC107601454,LOC106600617 coding upstream 248066 26236014 ~ 26250646 (+)
AMCG00017868 NA coding upstream 389223 26105497 ~ 26109489 (+)
AMCG00017864 slc30a9,LOC107680574,LOC107756435,LOC107550859 coding upstream 429872 26051424 ~ 26068840 (+)
AMCG00017865 NA coding upstream 466351 26022958 ~ 26032361 (+)
AMCG00017883 NA coding downstream 330406 26829576 ~ 26830170 (+)
AMCG00017882 gabrb1,LOC103364303 coding downstream 371831 26871001 ~ 26890831 (+)
AMCG00017881 NA coding downstream 440204 26939374 ~ 26967252 (+)
AMCG00017888 NA coding downstream 501392 27000562 ~ 27001794 (+)
AMCG00017889 pitx2 coding downstream 770065 27269235 ~ 27278351 (+)
G93736 NA non-coding upstream 544972 25953504 ~ 25953740 (+)
G93735 NA non-coding upstream 546335 25952068 ~ 25952377 (+)
G93734 NA non-coding upstream 547314 25951154 ~ 25951398 (+)
G93733 NA non-coding upstream 548340 25949736 ~ 25950372 (+)
G93688 NA non-coding upstream 981075 25517301 ~ 25517637 (+)
G93878 NA non-coding downstream 416743 26915913 ~ 26916481 (+)
G93891 NA non-coding downstream 484799 26983969 ~ 26988035 (+)
G93938 NA non-coding downstream 785552 27284722 ~ 27285066 (+)
G93986 NA non-coding downstream 1199554 27698724 ~ 27700728 (+)
G94039 NA non-coding downstream 1341883 27841053 ~ 27841261 (+)
AMCG00017843 NA other upstream 1446338 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 1782982 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 2386602 24108560 ~ 24112110 (+)
AMCG00017783 NA other upstream 3169143 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 5648095 20848356 ~ 20850617 (+)
AMCG00017886 NA other downstream 493721 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 973711 27472881 ~ 27697379 (+)
AMCG00017910 NA other downstream 2132722 28631892 ~ 28646750 (+)
G94275 NA other downstream 2934242 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 4320699 30819869 ~ 30831867 (+)

Expression


Co-expression Network