Gene
RNA
| Item | Value |
|---|---|
| gene id | G93938 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 27284722 ~ 27285066 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU117195 | True | 345 | lncRNA | 0.34 | 1 | 27284722 | 27285066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017889 | pitx2 | coding | upstream | 6371 | 27269235 ~ 27278351 (+) |
| AMCG00017888 | NA | coding | upstream | 282928 | 27000562 ~ 27001794 (+) |
| AMCG00017881 | NA | coding | upstream | 317470 | 26939374 ~ 26967252 (+) |
| AMCG00017882 | gabrb1,LOC103364303 | coding | upstream | 393891 | 26871001 ~ 26890831 (+) |
| AMCG00017883 | NA | coding | upstream | 454552 | 26829576 ~ 26830170 (+) |
| AMCG00017890 | elovl6,LOC107669077,LOC107723810,LOC107662963,LOC105906181 | coding | downstream | 66622 | 27351688 ~ 27360732 (+) |
| AMCG00017892 | NA | coding | downstream | 126294 | 27411360 ~ 27415163 (+) |
| AMCG00017897 | NA | coding | downstream | 459847 | 27744913 ~ 27768328 (+) |
| AMCG00017901 | NA | coding | downstream | 488787 | 27773853 ~ 27787082 (+) |
| AMCG00017900 | LOC107700316,LOC106919300,LOC106948245,LOC105915642 | coding | downstream | 526156 | 27811222 ~ 27837126 (+) |
| G93891 | NA | non-coding | upstream | 296687 | 26983969 ~ 26988035 (+) |
| G93878 | NA | non-coding | upstream | 368241 | 26915913 ~ 26916481 (+) |
| G93842 | NA | non-coding | upstream | 785552 | 26498712 ~ 26499170 (+) |
| G93736 | NA | non-coding | upstream | 1330982 | 25953504 ~ 25953740 (+) |
| G93735 | NA | non-coding | upstream | 1332345 | 25952068 ~ 25952377 (+) |
| G93986 | NA | non-coding | downstream | 413658 | 27698724 ~ 27700728 (+) |
| G94039 | NA | non-coding | downstream | 555987 | 27841053 ~ 27841261 (+) |
| G94055 | elavl2 | non-coding | downstream | 812667 | 28097733 ~ 28099214 (+) |
| G94057 | elavl2 | non-coding | downstream | 815667 | 28100733 ~ 28102094 (+) |
| G94069 | NA | non-coding | downstream | 1157700 | 28442766 ~ 28444925 (+) |
| AMCG00017886 | NA | other | upstream | 287270 | 26992891 ~ 26997452 (+) |
| AMCG00017843 | NA | other | upstream | 2232348 | 25050309 ~ 25052374 (+) |
| AMCG00017829 | smim14,LOC107700293,LOC107757606 | other | upstream | 2568992 | 24705270 ~ 24715730 (+) |
| AMCG00017817 | phox2b,LOC101065912,LOC106604546 | other | upstream | 3172612 | 24108560 ~ 24112110 (+) |
| AMCG00017783 | NA | other | upstream | 3955153 | 23301615 ~ 23329569 (+) |
| AMCG00017898 | kcnip4,LOC103360335,LOC100711851,LOC102780455 | other | downstream | 187815 | 27472881 ~ 27697379 (+) |
| AMCG00017910 | NA | other | downstream | 1346826 | 28631892 ~ 28646750 (+) |
| G94275 | NA | other | downstream | 2148346 | 29433412 ~ 29450347 (+) |
| AMCG00017978 | NA | other | downstream | 3534803 | 30819869 ~ 30831867 (+) |
| AMCG00018012 | NA | other | downstream | 5122363 | 32407429 ~ 32425235 (+) |
