G94008


Basic Information

Item Value
gene id G94008
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27762686 ~ 27767331 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117271
GTGGGTACATCTGTCACGCGTTTAATGACCAACAGTGAAAAAGTTTTCTTTATTGAGGTGATATTCCTTAACATGTAAAAAcaccagctgtataaatattataacaatACACATGTTccaaatgctttcatttcatatatatttgacttattttcatCTCCAAGTATTCATCATTAGTTATGACGCTGCAAACAGACATTTAGTGCGTTAGTGCATGTCTGTCATGCTTTCACAACCGGCACATCTCAAACAGGCACGAGCAAAACCGCAATAAGTGTTGAAAACTCTGAACCTCTCAATGGTGCCGCTGAAATCTCCAAATCCGGTGGCAGACAAACCTAAAGGAAGACCTGAGTACCGCAGTAATCAGGTGATAGACGTCCTAAAAATAGAGgcagagaataaaaacaacaacacacaatgtCTGTTGCATAATCATGGACGCGGTACTGGAGACAGCAATTCAAATCAGATGTATCTTATAGGTGTTACAGCTCATGAGGATACTTTGTGCTCATTGTGtcttttaaaagagaaatactAGGGTGAAGTGGTGTGTCAACAACATTTAGCAAAGATTATggaagaagagaaacaaaaccatCTAAAAACTCAACGTTTACTTACAACTTAAGCGATTTTAGTTTCTAAGCAACACGCTAAAACGTGTgaaaatcattttgtatttaattgactCAAAAAAgaaggcagaaaataaaatttgcTATTTAAATGTGCACCTAAAGCCTTAATTATAGTCTAAATAGTCACCTCccgtatatataaaaatacaaactactGAAGTGTTTTATAACCTGCAATTTCACTCTCTGTATTTTCACCAGTTTACGAAACATGtcccttaaaaataaacacagattcTCTGCAATATGAATCTCATCTAGAACTTTAGGAAGAtctttcattttacaatttcaatatattattaattgaaatacaaagcttaAATCATGTACAACGTGAATCAGTGTGAGAGACAACCTACCAACCTGCAAAGTGTAGGATAAAAACATGTCGTTTTGGTTTAGTAGACTGGAAATTCACTGCAATAATGTGCTTAAAATTTtagctgacacacacacacacacacacacacacacacacacacacacacacacaggaaactTGTCACACAATCTTAGAGGTCATACATTTGAAGCACACAAACTCCAACAACAGTTAATATATATAGTGTCCTATTCCCTCCTTtgttaaatgtgattttgaaaTGGGTATATTGTGTGACCTCTATGGGCAGCGCTGAGTAAAGGCTGTttgctaacaaataaataacaatgcaaacaaTAAGAGTGAAGGCAATCATTTTGAATAGATGGCAACAGAATCGGAAATAGAAGAAAAGGGCTTTTTGCTGGAGTTCAGTTATAAATACAGTCTATCAGATACACACTGTCACAATAAATACAGCTTCTTAAGAACCATTCAATCTCTGTAAAAGAATTTAAGACAATAAGCGTAAATcataataaagcacattttacgTGTTTGCTGATCTCACACCACATCTTAGTGCTCTGATACTCCGACTCACACCAACAGGATAAAAATAACACCCCTGTGTAACCAAATCCACTGCACTCTCACTTACCAAACTATCCTTCATTAATCACAGCAGCCGCAGTGACAAAACCCCTCCTATATATTGGAATAATCTTCCACACAAAGTCTTAACTACACATAGCATGTTGTGTACAGCAAAATCCACCCTGACAATGAAGTTACATGATTCCTACGTGTGTCAATCATactcttaaaaacaacaaagtttgCTCCCTGCATACAatattttctgctttatttaaattattagaGAGAATTTCTGTGTAGATAAAACCGGTTCAGATTTGAATCTGAACATAATTATAGTTCTGAATCTCTAAATAATAACCTCCATAGTGTAGCCAAGACACAGCGGCCTAAGACGTCCTGCTCTGTGAAAGCACGTTGCGCAGCTTGTGTCTCACACGGACGCAGCGCTTGGCCGTGTCACATGTGATTTGGGTTTCTCTGGTGACCCATGACCCATGACCCAGGGTATTTATCacactgtgtttttgtggtgCAGTGTTGCCACAGAAAAgttgtgctttttattaatttaatatcacttttgtattattgtgttacattgtgttgtaatcCAATGAAGCCACACATGTATAGCTGGCCTGTATCAACAGCACATTGGTGAAAACTTCGCTCTATTCCTATTCATTACTAACTTAAACATAAACATCTGATCACTGGCATGTTTCTTCCACCCTGACCACGGAGTGTAAACTAACATGTCCTCTGAAACACACTGCAGTCCTTAGACGCACAACTTCCTCTCCTTTTCTTTAACACAAAAACGGACATCAAAACCGAGAATACAGACtagtgacatttatttaatagcGTTGTCAGAGAAGATAGTGTAGCTGTCCTAAAAGCAACTGCCCCCCCTTCAAAAGCATCACAAATCAGCCCAGTGGAGCTCGCTGCTCCTCACTCTAGGGACTTGTGTTCACACTTCAGCTGAGGATACACACATGACACTTTACACATCTCTAACCAAACTACAAACACTGAATTATTCATGTACAGGAGATAACTGTCACTTGCATACCTTAAGCCAGTGTTTCTCGGTAGCCCTCTGTGGTCTGGTTTGCgttctggttttcatttgcTTATTCAAATCCTTTACCTTTACAATaatttcaattaagcaattatagtTGATTTACACTTCCAATTGGTTATTCAGGGATCTGCTGGAACACACCCTGCAACCGTTGCTGAAAGCCGTTATTTTAGATGAAACATAACCAAACCAAAAAGTAACAAAGGGTTTATGCCAAACAGTTTACCTTTTGTAGACACAGTTATTCACGAGTAGAGATGAGACACTGGCAAGCCTTTCGTCTGTGTTACATCGAGTGGATTTTTAACATCAGTGTAATTTGAATTCTTACTGTGAACAGACAACATCTCAAAACACAACCAGGAAGGAACATGGACATTAGATTCTGCAGCTCGCAAATCTGCCGCGATGGTGCatgagtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactacGTTTCATTAAACCCAACCCACTGTGCAGGAGGTGTGTTTCAGTCTGTGGAGTCTGATGACATCACTACCAGACATTATTCTACACACCAAGATGATGGGCATTTGGCTTCTACAACCTCTGAGTACTCAACACAACTGACAATGACAATCTATGTTCCTACAAGCCATAGAGTAATTACTTTACTAGGGAGAAGTTGTACGTCTCAAACCCAGCTCTATGagtccacattttgtttttcccaagGAAGCAGATCCGCGCTGAGCTTACGACCAAGTTTCACCCGAAAAGCATTCGTTCCCAGCAAGGGTGTGCCTGGCATCCTAGCTCTCTGTGAAGGAATGGGAATGCCAAGACCTTCCAGTGAAGACATACTCTctgactgtgtgtttgtcttcctGTGGTGGTGCCATTTTAGGAGATCCTCAACAGCACAATACAActagcaacaacaacatcaacaacatcaaaacaacAGAAGATGGGTCCCTCCAGAGATTTTCTACACTTCCACTTTCTCTGTTTATACACATAGTTTTCCCAATCATAAACTACTGccataaacatgtttttctcctTGCGTTCAGCTCAGAAATACAGGGCTGATGTTAACCATCTCAATATCGTAAACCACAGATAATTACCGTCTCCACGCCCGGGGATAGATGTTATAGTTTGGATCACTCACTGACCGCCCGTACGCCCCATAGTCAGGCCCCGCCCCCAAGCCCCGGATGTTGGAATCAGTCATTGACCTCTGAGGCTGATAGGCGTATCTGCAGGGGGAGCCGTACTGGACGGTGGATGCCGGGGCGGACATGGAGCTCTTGGAGGGCGATGTGTAGGATGAGGATCGCTGGTGCTGGAGTCGGCCTCTCTGTGACGACTCGTAGGACACCCTATCCTTCCACGCCGCCGGCGGCTCAGGCAGGGACTTCCTGTGGGCGGCGGAGATGACGTTGGAGGCAATGGACTGCTGGAGGTTCTGGTAGGAGAAGGCTGCGTCTACCAGACCCAGGGGGTTGCGGGCCGCGGCCTCCCAGGGCGAAGGCGGCTTGACGCTCTTATCCATCCAGGACGGCTGCCGGTCGAAGGGCCCCTTTGAGGGCATGAATACCGGGCTGTGCACCGGGGAGTCGTAGCCGGACATCGAGGGCATCCTCCGGGGCAGAGACAGGGAGTAGCGCCGGCTGATCTCCTGCAAGGACAGGGTTTAGACATGATGAAGGGAAACACGCAGACTGATGGATCATTACTCAGGACCGTGACACAGTGTGGGGTGTAGTCAGGGAGAGGAGGTACATGAGACGGGGTCCGGATCATACCTTATCCCATTGGAATCATTTACTGTCTAACCGACCCACTTCTGTTCAAGGACCCGATAACGAACCAACCAATTGGACAATCACTGCGGTGCTAACTCTAGTCCCCGCTCAAGCATCTGTTCTACTTGGCAAGCCTGAAAGCAGCCCGACCCGAGCT

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU117271 True 4609 lncRNA 0.43 2 27762686 27767331

Neighbor

gene id symbol gene type direction distance location
AMCG00017899 NA coding downstream 38955 27698901 ~ 27723731 (-)
AMCG00017895 NA coding downstream 330110 27427479 ~ 27432576 (-)
AMCG00017893 NA coding downstream 336454 27415574 ~ 27426232 (-)
AMCG00017894 NA coding downstream 354129 27400504 ~ 27408557 (-)
AMCG00017896 NA coding downstream 367026 27368219 ~ 27395660 (-)
AMCG00017903 NA coding upstream 74881 27842212 ~ 27844771 (-)
AMCG00017907 NA coding upstream 666701 28434032 ~ 28443288 (-)
AMCG00017908 NA coding upstream 690365 28457696 ~ 28457938 (-)
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding upstream 801629 28568960 ~ 28569655 (-)
AMCG00017911 NA coding upstream 882610 28649941 ~ 28664695 (-)
G93843 NA non-coding downstream 1263509 26498914 ~ 26499177 (-)
G93816 NA non-coding downstream 1408962 26353517 ~ 26353724 (-)
G93802 NA non-coding downstream 1504319 26258096 ~ 26258367 (-)
G93718 NA non-coding downstream 1952833 25809544 ~ 25809853 (-)
G93689 NA non-coding downstream 2245086 25517286 ~ 25517600 (-)
G94012 NA non-coding upstream 11706 27779037 ~ 27784050 (-)
G94060 NA non-coding upstream 326137 28093468 ~ 28097158 (-)
G94073 NA non-coding upstream 652585 28419916 ~ 28420262 (-)
G94074 NA non-coding upstream 657701 28425032 ~ 28425243 (-)
G94137 NA non-coding upstream 966493 28733824 ~ 28735744 (-)
G93796 NA other downstream 1652612 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 1654881 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 1746744 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 1805038 25945141 ~ 25957648 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 2744474 24997544 ~ 25018212 (-)
AMCG00017902 NA other upstream 70920 27838251 ~ 27839790 (-)
AMCG00017906 elavl2 other upstream 331574 28098905 ~ 28144589 (-)
G94172 NA other upstream 1106830 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 1501904 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 2818398 30585729 ~ 30596417 (-)

Expression


Co-expression Network