G94039


Basic Information

Item Value
gene id G94039
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27841053 ~ 27841261 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117309
cttgcacttgtccacattgaatttcatctgccaggaaGCTGTGATTCCTGTGTGTGAGGACCTCCTCTCAGATCCCAGTGATGCTTCCCAGTACAGTCTTCTCTTCATCTTTATTCTTTGGCATCAATTCCATAAATCTAATTGGAAAATTACTGATCTCTAGCACTCCATTTTTGTGAATTATTGGTCCCAACGAAGTGCATATTTGG

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117309 True 209 lncRNA 0.41 1 27841053 27841261

Neighbor

gene id symbol gene type direction distance location
AMCG00017900 LOC107700316,LOC106919300,LOC106948245,LOC105915642 coding upstream 3927 27811222 ~ 27837126 (+)
AMCG00017901 NA coding upstream 53971 27773853 ~ 27787082 (+)
AMCG00017897 NA coding upstream 72725 27744913 ~ 27768328 (+)
AMCG00017892 NA coding upstream 425890 27411360 ~ 27415163 (+)
AMCG00017890 elovl6,LOC107669077,LOC107723810,LOC107662963,LOC105906181 coding upstream 480321 27351688 ~ 27360732 (+)
AMCG00017904 NA coding downstream 66483 27907744 ~ 27909564 (+)
AMCG00017905 NA coding downstream 75165 27916426 ~ 27919140 (+)
AMCG00017914 NA coding downstream 832147 28673408 ~ 28692303 (+)
AMCG00017913 NA coding downstream 858782 28700043 ~ 28705029 (+)
AMCG00017915 NA coding downstream 880678 28721939 ~ 28735137 (+)
G93986 NA non-coding upstream 140325 27698724 ~ 27700728 (+)
G93938 NA non-coding upstream 555987 27284722 ~ 27285066 (+)
G93891 NA non-coding upstream 853018 26983969 ~ 26988035 (+)
G93878 NA non-coding upstream 924572 26915913 ~ 26916481 (+)
G93842 NA non-coding upstream 1341883 26498712 ~ 26499170 (+)
G94055 elavl2 non-coding downstream 256472 28097733 ~ 28099214 (+)
G94057 elavl2 non-coding downstream 259472 28100733 ~ 28102094 (+)
G94069 NA non-coding downstream 601505 28442766 ~ 28444925 (+)
G94104 NA non-coding downstream 809887 28651148 ~ 28652294 (+)
G94189 NA non-coding downstream 1198749 29040010 ~ 29041944 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 143674 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 843601 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 2788679 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 3125323 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 3728943 24108560 ~ 24112110 (+)
AMCG00017910 NA other downstream 790631 28631892 ~ 28646750 (+)
G94275 NA other downstream 1592151 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 2978608 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 4566168 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 4620037 32461298 ~ 32466636 (+)

Expression


Co-expression Network