G94057 (elavl2)


Basic Information

Item Value
gene id G94057
gene name elavl2
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28100733 ~ 28102094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117333
TGAGGAGATTGTCCAACctgAAACGCTGCGCCTGCTGGGCGAGGGGTCCCGGGTACCGCCTGTTGGGGGACTGGTACAGCTGGGAGAGCAGGGCCTGGCTGGTCTTCTGGCTGGGGTTGTTTGCAAACTTCACCGTGATGGGTTCTGTGGCACCGGGCGGCTTCTGGCCATTCAGGCCCTTGATGGCTTCCTCGGCCTCGATTCTTCGGTCGAACCGGATGAAGCCGACCCCCCTGGAGACGCC

Function

symbol description
elavl2 Enables mRNA 3'-UTR binding activity. Predicted to be part of ribonucleoprotein complex. Is expressed in central nervous system; head; ovary; and primordial germ cell. Orthologous to human ELAVL2 (ELAV like RNA binding protein 2).

NR:

description
PREDICTED: ELAV-like protein 2 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117333 True 244 lncRNA 0.64 2 28100733 28102094

Neighbor

gene id symbol gene type direction distance location
AMCG00017905 NA coding upstream 181593 27916426 ~ 27919140 (+)
AMCG00017904 NA coding upstream 191169 27907744 ~ 27909564 (+)
AMCG00017900 LOC107700316,LOC106919300,LOC106948245,LOC105915642 coding upstream 263607 27811222 ~ 27837126 (+)
AMCG00017901 NA coding upstream 313651 27773853 ~ 27787082 (+)
AMCG00017897 NA coding upstream 332405 27744913 ~ 27768328 (+)
AMCG00017914 NA coding downstream 571314 28673408 ~ 28692303 (+)
AMCG00017913 NA coding downstream 597949 28700043 ~ 28705029 (+)
AMCG00017915 NA coding downstream 619845 28721939 ~ 28735137 (+)
AMCG00017912 NA coding downstream 666199 28768293 ~ 28787501 (+)
AMCG00017920 papss1 coding downstream 767780 28869874 ~ 28897965 (+)
G94055 elavl2 non-coding upstream 1519 28097733 ~ 28099214 (+)
G94039 NA non-coding upstream 259472 27841053 ~ 27841261 (+)
G93986 NA non-coding upstream 400005 27698724 ~ 27700728 (+)
G93938 NA non-coding upstream 815667 27284722 ~ 27285066 (+)
G93891 NA non-coding upstream 1112698 26983969 ~ 26988035 (+)
G94069 NA non-coding downstream 340672 28442766 ~ 28444925 (+)
G94104 NA non-coding downstream 549054 28651148 ~ 28652294 (+)
G94189 NA non-coding downstream 937916 29040010 ~ 29041944 (+)
G94236 NA non-coding downstream 1171653 29273747 ~ 29274011 (+)
G94245 NA non-coding downstream 1184099 29286193 ~ 29286745 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 403354 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 1103281 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 3048359 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 3385003 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 3988623 24108560 ~ 24112110 (+)
AMCG00017910 NA other downstream 529798 28631892 ~ 28646750 (+)
G94275 NA other downstream 1331318 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 2717775 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 4305335 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 4359204 32461298 ~ 32466636 (+)

Expression


Co-expression Network