G94060


Basic Information

Item Value
gene id G94060
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28093468 ~ 28097158 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117336
TTGAACAAATTTGCTTACGTTTTTTCATACCAACTTAATACGTGTATgctgttaaaataaactttaaaaaaagtgtatacTGCGCTTAAACCACTTTGGGGGAATAATTAAGCAGTTTCTTGACCTATATTAAAAGTGGGTTTCAAGTAATCTGAGTAACATCTTGCTTATCTTATTATTGAACAAATGAAGGCCGTCCAGGCCTTCGATGCACTGATTCCTGTACCTACATCCTGCTTTGTATAAACGTAATACTCATGCTTCCCCTTATAACAAGCACTGTGTTATGCATTCTGTATCTATCTTTTGTTCGTTGGGTTTTGAGTGTGTAGAGATCGAACCTTCGGTGTCGTGTCCGCTGTCACACGCGCTGCTGGGTGCGTTCGTCCTGCCGAGACCACTCAATGCTGTTTAGGCCACAAGCTGCTGGGATGGGGGGTTtgggtgtggggaggggggtctAATTTCTCTGCAGTCTTCAGATTGTCAATAACGTTACATGCCTTAGCTTGTCTGAGAGGTTCTGCTTGATTCTCTCCCCAGTTTTGTTGAGACCAGGTCCAGGAACGCACGGTCGGGTGCAATTTTAGGCGCTGGTTGGCAAAGTGTGGGTCCTGATGTCGATTTGGTGGCACAGTGGACCGTTGACTATACACCCCGTCAGTTTGTCGGTGACGCCCACTGATCACTATTTTATAGAAGTGTTCCTCTTTCTACTTCTAAACTATGCATTGGGCCATTTTCATTCATTCCTCTCTTTGTTATTGAAATCGCATGCAATGAAGCTACACCCCGAGctctcagtgtttgtgtttttatgaatcTTTCCTACGCATTGAACAGGCGGCACCAAAGAGCCAGTCAGGGCCAATTTAACTGTCAGGGATGGGCCACTCGGCTGCTAATGAGGGGTAGACCCAGCACTTTAATATCCCTGTGTGTGAGTACATCTCCGTAGGTTAAATTGCTGTGGGGAGGTGGCTATGACTTCTCTGAAGCCTCCTGTTGTCCCACTTTCTTAATTAGTGTAAAACACAACAGGCTGATTGGCTTTGAAAAAGTGTGGCGACTAAATCAGGAAGGAAAATGATAAACTGGTCTCTCCATGATGCAAGGGGAGAGCGGACTTGTCGCTTTCTGTGTGGTCTGTTGCAGGTATTTTGTCTGAGAACATCCCAAAATCCTCCCGAGGAAAGTGATCTCGGCATTGCAGAAGAGCCACCTGTTCTCCTGCTGGGAAAGATGGACACCTGAGGGCAGAATGAGTCAGTAAATGTTGGGTGATTTTGCCTTTAGCGTCTTGGTTTCTCTGAACAGAACAGTCCCATTTCAGATTGTCAAATACACTGATTCTCTGAATGCAATGCATCAattttgcataaataaaacTGGCTAGTCTGGCAGAAAGTGCCTGTTTTAAAACTATAGTGGCAACATTTTTGGCAGGAAATGCGAGTGGTGGGAAGGTTAATGCAGCAGAAGTTTCTTAATGCCACTGCTTTGGCAGGAATGGGATCGTATTTGAGGCACAGTTTCCATTATGTGAGGGTTTGTcttccaaaaatgtatgttaaaaaagttttcttttcaGAGAAACCACGTTGTCCGTCGCGACCGCTAGGGGACGGCAGGGTTTGCGATGAATTAAATCGCAGGAGTCGCCCCTCTGCCTACGAAGCGTGGGCTCGTTGGATTGTCTGCAGAATTGACTCGTCCTGTGAATGAACACAAGCCTCACGCTTTACACACATCAGGCCTCTATGTAGCTAATGACAGGTGTGACCCTTCCTGACTAGCCtttgtcatttttaacacaTCTAACGAGTTACACCGTGTATTTATAACCTACCGTCACTGTATATGAAGTCTGATATGGATTATTTTAACAATGGCTGCTTGGTAggaaatagtaatagtagtaaacCATGTTAATTGAGTTAACTTCTGCATCATATGTAAGTGGAACAGGTACGCATCGGCTCACACCCATCGATGCTAAATCAGGGCTCCATTACAGgtgaataatgcatttataaaatcaacacaaacattaaatgaaGGAGACTAAAACACAACATTCAGGAAAAGAGACTTTAAAAACTGTTAATTGTCTTGAGGAAAATCTGCCCTCCTTTTAGTGTCGCTCTGTAGTTGTTTGGGGATGCGATTGTCATCCAGTTAGGAGCGGATTCATATTAAGGTTTCTATCGGTCAAAACCGCACTTCCCTTGTTTAACCTACACCCCCACTCCACAGTCCCCGTCTACTCCACTGTTTGGGTTTAACtttagctttattttaaaatcaatatctAAAGCAACTTggttataatgtatataaatgagCCTTTTCAAAACACATCTATATACACCACATACAGTGGCTTAACCAGGGAGAGGCAAATGCCACCCCCACCCATAGAAAGCTTTGTCGCCCAACGGTCGGCACCATTTTATACAGCTCTCTAGTTTCAATTCACCCCTATAAAATCAGTCTACCGGCCCAGAACTGATCTCATCTGCTGGTGGAACAAACCATTCGACAATATGCAAACTAATTTTTAATAGAATTTGTGTGGGCAGTGTTTATCTTGTGAGGAATGCATGTATTGTGCGAACACTTTCCTGTGCGATGCACACCTGAAGCAAGACAATTGCAGTGAGGGGTCCAACTAGGGGACATGTGGACACTCTGCCACTGGGGGGCCCAAGTCAGCAGCTTACAAGTGAAACCTTCAGAGAAACTTACTGGTAATTCGCAGTAGCCATGTCCagcataaaaatgataaatggtaatataacgaggatttgaatgttaatgaaTCGATTCTCCCCACTTGAAAAGTGCCCTGAACATCTTTCCACCCCCCACTTCAGTCTACTTCCCCAACtccacacacatttacacacttgTCATATAACGGTCTTGAATAGCTTtgtgatatagatatatattgtgtaaaaataGACTATTACGCTGTATAAAAGTCACTTCCTCACTGACCGCACAGTTTTGGCTTCAATAGACGCACTTTGGTATTTTATTGGTTTGTATTACAACAAATCTAACAGTTTGCCACGTGGGCTGGGTGACCCGTCGAGATACAGAGCTGGTAAGTGTAACGGCTGTTGCGTCCGCATGTGCTCTGTGCTGCTTATCCTTCGGGTGGGACGGGTGGTCTTTTGAGGGGGTGGTAGTAATGCCTCCGACATAGTGAATGTATTGATCTCTCAGATTAACCGTGACACTTCCTGGTTTATACAGTACCAGTCGCTGCTGGCTTGACATGTAATTTCTTGAATCTATATATATGTCAGACTGCACGTCTTCACGAACACTGTAGGGAAGATGGACGAACCACAAGGACGTAGGGGACGAAACAAACCATGAATGTAAGGCCTAAACGCAGCTCACGAAAGCATTGGTGGTCTGGCAAGACGGCGGCACAGGAAGCGGCTTCGCTGCGGCGCGTTTCCGAGGACGATTCAGATGTAAGCTtggtatatttatttgaagttgTACATTTATGACTTGGTTCACATCTGTTGGTATCTAATCTATCTTCTGTTGAGTATTTAAAAGGATGTACCTGttactttatttgtgtttggatttttgtatttttttttcatgttcagtACATCAATAAACAAGTTGAAGGGAAAA

Function

GO: NA

KEGG:

id description
ko04725 Cholinergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU117336 True 3666 lncRNA 0.43 2 28093468 28097158

Neighbor

gene id symbol gene type direction distance location
AMCG00017903 NA coding downstream 248697 27842212 ~ 27844771 (-)
AMCG00017899 NA coding downstream 369737 27698901 ~ 27723731 (-)
AMCG00017895 NA coding downstream 660892 27427479 ~ 27432576 (-)
AMCG00017893 NA coding downstream 667236 27415574 ~ 27426232 (-)
AMCG00017894 NA coding downstream 684911 27400504 ~ 27408557 (-)
AMCG00017907 NA coding upstream 336874 28434032 ~ 28443288 (-)
AMCG00017908 NA coding upstream 360538 28457696 ~ 28457938 (-)
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding upstream 471802 28568960 ~ 28569655 (-)
AMCG00017911 NA coding upstream 552783 28649941 ~ 28664695 (-)
AMCG00017916 NA coding upstream 597390 28694548 ~ 28698519 (-)
G94012 NA non-coding downstream 309418 27779037 ~ 27784050 (-)
G94008 NA non-coding downstream 326137 27762686 ~ 27767331 (-)
G93843 NA non-coding downstream 1594291 26498914 ~ 26499177 (-)
G93816 NA non-coding downstream 1739744 26353517 ~ 26353724 (-)
G93802 NA non-coding downstream 1835101 26258096 ~ 26258367 (-)
G94073 NA non-coding upstream 322758 28419916 ~ 28420262 (-)
G94074 NA non-coding upstream 327874 28425032 ~ 28425243 (-)
G94137 NA non-coding upstream 636666 28733824 ~ 28735744 (-)
G94218 NA non-coding upstream 1110312 29207470 ~ 29207804 (-)
G94246 NA non-coding upstream 1189049 29286207 ~ 29286747 (-)
AMCG00017902 NA other downstream 253678 27838251 ~ 27839790 (-)
G93796 NA other downstream 1983394 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 1985663 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 2077526 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 2135820 25945141 ~ 25957648 (-)
AMCG00017906 elavl2 other upstream 1747 28098905 ~ 28144589 (-)
G94172 NA other upstream 777003 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 1172077 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 2488571 30585729 ~ 30596417 (-)
G94543 NA other upstream 2530830 30627988 ~ 30658493 (-)

Expression


Co-expression Network