G94069


Basic Information

Item Value
gene id G94069
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28442766 ~ 28444925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117345
CTGGACTCCGTGCTCCTCCGTTTGCGCTCCGCATGGCGCGGCTCCGAGTGGGAGTGCTTCCTCTTCTTGTCCTTCGCCGTTTTCTTCCCTGTCATTTCAAACACACGCCACGAAGAGCACGGTCCAAGTCCTGGAAATCggtgagaaaataaacaaagtgttGCCAATTCAACATGAAGATGGGCGTAGTTCGTGCGAGCCTCACAGTTCGCGAGCTCTGCTTTCGAAACGATTGTTTGTCGCGCTTTCTTTACGTCATCGCGCCACAGCCGAAACGGAATCCACCATCGATATAAGAGAGCACTAGATTGTCCCACGCCTGTCGTCCATCTTGGGATCGGGCAGCCAGTCAGAGAGCAATGGGCCGCAGACGAAGAGTTCCTCCCACAAACTCAGCTTCCAGAAAAAAACTACAGTGTGTTGTGCCAGACGCCGCCTCGCAAACGAGCAGGACAAAAGGGATTATAAGAGCGGAGAGGGTCTCTCCATGGAAGacgagaagaaaaacagaaacactccGGACATAAACTGGACTGCTGGTGCCGCCCCTCCTGGTGGAGAAGACCGGATCCCCTCACAAGGAGACGCACCCCACTGGGGGAAAAGCACGCCAGTGCTGGGAACGCGGCACGAGTCAAACCTCCAGCACGAGATGGgagtgtgtgaaagtgtgtcaATGAACTTTTAATAGCTTTTGTGTTGCCTTCTGGTCTGTGGTTGTGTTGTTACAGTTCCATACAGTGTCATATAGTGAACAAATATCATAATGCAGTTGTGCTGTTCCAATTGTGTTCCAGTTGACTTTTGATAATAAAAGATGTTGCTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117345 True 830 lncRNA 0.51 2 28442766 28444925

Neighbor

gene id symbol gene type direction distance location
AMCG00017905 NA coding upstream 523626 27916426 ~ 27919140 (+)
AMCG00017904 NA coding upstream 533202 27907744 ~ 27909564 (+)
AMCG00017900 LOC107700316,LOC106919300,LOC106948245,LOC105915642 coding upstream 605640 27811222 ~ 27837126 (+)
AMCG00017901 NA coding upstream 655684 27773853 ~ 27787082 (+)
AMCG00017897 NA coding upstream 674438 27744913 ~ 27768328 (+)
AMCG00017914 NA coding downstream 228483 28673408 ~ 28692303 (+)
AMCG00017913 NA coding downstream 255118 28700043 ~ 28705029 (+)
AMCG00017915 NA coding downstream 277014 28721939 ~ 28735137 (+)
AMCG00017912 NA coding downstream 323368 28768293 ~ 28787501 (+)
AMCG00017920 papss1 coding downstream 424949 28869874 ~ 28897965 (+)
G94057 elavl2 non-coding upstream 340672 28100733 ~ 28102094 (+)
G94055 elavl2 non-coding upstream 343552 28097733 ~ 28099214 (+)
G94039 NA non-coding upstream 601505 27841053 ~ 27841261 (+)
G93986 NA non-coding upstream 742038 27698724 ~ 27700728 (+)
G93938 NA non-coding upstream 1157700 27284722 ~ 27285066 (+)
G94104 NA non-coding downstream 206223 28651148 ~ 28652294 (+)
G94189 NA non-coding downstream 595085 29040010 ~ 29041944 (+)
G94236 NA non-coding downstream 828822 29273747 ~ 29274011 (+)
G94245 NA non-coding downstream 841268 29286193 ~ 29286745 (+)
G94255 NA non-coding downstream 862175 29307100 ~ 29310853 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 745387 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 1445314 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 3390392 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 3727036 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 4330656 24108560 ~ 24112110 (+)
AMCG00017910 NA other downstream 186967 28631892 ~ 28646750 (+)
G94275 NA other downstream 988487 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 2374944 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 3962504 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 4016373 32461298 ~ 32466636 (+)

Expression


Co-expression Network