G94137


Basic Information

Item Value
gene id G94137
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28733824 ~ 28735744 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117425
CTGTGCAAATACAGTTCAAAGGCTTCATATatcaataaagcaaaacaaacgaGGGTCCAGATAAAGACAAtggtctgaaaaataaataacccccAAGCTCTCCTAAATAGGAACGAGACACAGAAACCAGACTGCGTGTGGGACTCCAGAAATAAAAGTCAAGACACAAGatgggatttaaaaacaaaaataaagaacgacggttgttttttatttaacacacactTGCATGGCAGCTCTCAGTCAGTTAAGACTCAAACCCACACTCTGGGGAGAGAGGGTGACAGCCGTTATATCCGCAGAGTTAATTCTGTTCGGCACGAGTGGCAGGATCTTTTTCTCCAGTATCTGTCATCTTCACACGTTTCTCTGGAAATAAAATCGGTGTTCAGTTTGTAGTCCTGAATGCTGAGGTGCTTTTAATGTCACCGTTTAAAACCaaggaagaaacacaaatacgAAACGCACACAATCcacacacaatgtaaaaaacaaGAACCAAATATTGTTCTGAGGCAATCTGTGAGGGGGAGCTTCTGGGCTGATCCGGATTCATCTCAGCTCCTCCACTTGTGGGAGCCGCACGACCATGGCCCTTCTCTGCCCTTCAGATGGGGGTGCGGACCACCGGGACCCCCACCAGCATGTTGTTCTTGGGCGAGCAGCTCTGGGGCTCCATGGACATCACCCTGACGGAGTAGCCGTGACTCTCTGCAGCCCAGGACCGGTCCAGGTCCACCAGACCCATGCACTGCTTACCTGCCAGGCGGggacaaaataaaacctgtttcagGTCNNNNNNNNTCTCTGGTCCACACATCTGTCGTTCAAAAGTCTGTACGGGCCGATATGTTGCGACGCTCCTTTAGATCTAAACTGCTTGATTCAAAGATAAtattagataatattcagttttgggccgacacctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117425 True 929 lncRNA 0.47 2 28733824 28735744

Neighbor

gene id symbol gene type direction distance location
AMCG00017916 NA coding downstream 35305 28694548 ~ 28698519 (-)
AMCG00017911 NA coding downstream 69129 28649941 ~ 28664695 (-)
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding downstream 164169 28568960 ~ 28569655 (-)
AMCG00017908 NA coding downstream 275886 28457696 ~ 28457938 (-)
AMCG00017907 NA coding downstream 290536 28434032 ~ 28443288 (-)
AMCG00017917 tbck,LOC102796740 coding upstream 79237 28814981 ~ 28841636 (-)
AMCG00017918 NA coding upstream 110634 28846378 ~ 28852152 (-)
AMCG00017924 aimp1,LOC107684278,LOC107675933,LOC107729369 coding upstream 296135 29031879 ~ 29049397 (-)
AMCG00017925 lef1 coding upstream 343265 29079009 ~ 29091940 (-)
AMCG00017926 lef1,LOC103361279 coding upstream 364764 29100508 ~ 29117642 (-)
G94074 NA non-coding downstream 308581 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 313562 28419916 ~ 28420262 (-)
G94060 NA non-coding downstream 636666 28093468 ~ 28097158 (-)
G94012 NA non-coding downstream 949774 27779037 ~ 27784050 (-)
G94008 NA non-coding downstream 966493 27762686 ~ 27767331 (-)
G94218 NA non-coding upstream 471726 29207470 ~ 29207804 (-)
G94246 NA non-coding upstream 550463 29286207 ~ 29286747 (-)
G94337 NA non-coding upstream 1176238 29911982 ~ 29914837 (-)
G94358 NA non-coding upstream 1260505 29996249 ~ 29997513 (-)
G94359 NA non-coding upstream 1262610 29998354 ~ 30002282 (-)
AMCG00017906 elavl2 other downstream 589235 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 894034 27838251 ~ 27839790 (-)
G93796 NA other downstream 2623750 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 2626019 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 2717882 26012488 ~ 26015942 (-)
G94172 NA other upstream 138417 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 533491 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 1849985 30585729 ~ 30596417 (-)
G94543 NA other upstream 1892244 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 3523963 32259707 ~ 32263865 (-)

Expression


Co-expression Network