G94189


Basic Information

Item Value
gene id G94189
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29040010 ~ 29041944 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117487
ACCTGCTCCAGGGGCACGTGCTTCACCAGCCCGCTGACCACTGTCCTGGGTGCCGCCTCGCCCACGTCCACCTCCTCCACGTACAGGGCGTCGGCGTCCGGGTGCTTCTTGGCCGTCACGATCCGGCCGACGCGCAGGTCCAGGCGGGACACGTCCACCGTCCGGGCCTCTTCCTCCCCGCCCCCCGGCTGCTTCTTCTTCTCTCCGGCCTTCTTCTCCAGCTtgtccttcttcttcttgtcctcGCCGTCCCTCTGCGCTTTGTCCTTATTGACGGCGGCGGACGGAGCAACGGATCGGATTGGCTCGGGGTCAGGGGGCTGCGACGTGGACGGCGTGGCGGCGTCCGCAGAGGGGACTGCGACCGGTTTCACTGCAGACAcaacagggagagagaacagTCTTTTGTAGCAGTTGTCTGAACCCAAGACAAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117487 True 436 lncRNA 0.65 2 29040010 29041944

Neighbor

gene id symbol gene type direction distance location
AMCG00017922 NA coding upstream 10637 29026015 ~ 29029373 (+)
AMCG00017919 NA coding upstream 73132 28955480 ~ 28966878 (+)
AMCG00017920 papss1 coding upstream 142045 28869874 ~ 28897965 (+)
AMCG00017912 NA coding upstream 252509 28768293 ~ 28787501 (+)
AMCG00017915 NA coding upstream 304873 28721939 ~ 28735137 (+)
AMCG00017923 NA coding downstream 9210 29051154 ~ 29055527 (+)
AMCG00017921 hadh,LOC107594428 coding downstream 14672 29056616 ~ 29060724 (+)
AMCG00017927 NA coding downstream 208443 29250387 ~ 29257707 (+)
AMCG00017931 NA coding downstream 300251 29342195 ~ 29353887 (+)
AMCG00017936 NA coding downstream 326827 29368771 ~ 29416813 (+)
G94104 NA non-coding upstream 387716 28651148 ~ 28652294 (+)
G94069 NA non-coding upstream 595085 28442766 ~ 28444925 (+)
G94057 elavl2 non-coding upstream 937916 28100733 ~ 28102094 (+)
G94055 elavl2 non-coding upstream 940796 28097733 ~ 28099214 (+)
G94039 NA non-coding upstream 1198749 27841053 ~ 27841261 (+)
G94236 NA non-coding downstream 231803 29273747 ~ 29274011 (+)
G94245 NA non-coding downstream 244249 29286193 ~ 29286745 (+)
G94255 NA non-coding downstream 265156 29307100 ~ 29310853 (+)
G94260 NA non-coding downstream 280628 29322572 ~ 29323345 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding downstream 535212 29577156 ~ 29577403 (+)
AMCG00017910 NA other upstream 393260 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 1342631 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 2042558 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 3987636 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 4324280 24705270 ~ 24715730 (+)
G94275 NA other downstream 391468 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 1777925 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 3365485 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 3419354 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 3465746 32507690 ~ 32601449 (+)

Expression


Co-expression Network