G94236


Basic Information

Item Value
gene id G94236
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29273747 ~ 29274011 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117545
AATACAAGTTTGGTATAGCCTTGACGTTCCCCACCCTTTTTTATAAATGGTAATGTAAATGCGACCTATGAATGATGCCACGGGATAATGTACACAACAGCAATTGTACCAATCAGTGGGGGAACCTCTATTCATTACGCCAGTTAAAGTTTATTCTAGTTTACACAGTCTAGCGTCTGTGTATTTTGACACATTTAACCAAACATGGGCACTGCGTATGCGTTAACTGAACTGACAATGTGCCTAATTGAATCAATTTAAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117545 True 265 lncRNA 0.39 1 29273747 29274011

Neighbor

gene id symbol gene type direction distance location
AMCG00017927 NA coding upstream 16040 29250387 ~ 29257707 (+)
AMCG00017921 hadh,LOC107594428 coding upstream 213023 29056616 ~ 29060724 (+)
AMCG00017923 NA coding upstream 218220 29051154 ~ 29055527 (+)
AMCG00017922 NA coding upstream 244374 29026015 ~ 29029373 (+)
AMCG00017919 NA coding upstream 306869 28955480 ~ 28966878 (+)
AMCG00017931 NA coding downstream 68184 29342195 ~ 29353887 (+)
AMCG00017936 NA coding downstream 94760 29368771 ~ 29416813 (+)
AMCG00017940 LOC106610258,LOC102204558 coding downstream 466923 29740934 ~ 29756915 (+)
AMCG00017941 NA coding downstream 483543 29757554 ~ 29764700 (+)
AMCG00017942 NA coding downstream 532629 29806640 ~ 29833363 (+)
G94189 NA non-coding upstream 231803 29040010 ~ 29041944 (+)
G94104 NA non-coding upstream 621453 28651148 ~ 28652294 (+)
G94069 NA non-coding upstream 828822 28442766 ~ 28444925 (+)
G94057 elavl2 non-coding upstream 1171653 28100733 ~ 28102094 (+)
G94055 elavl2 non-coding upstream 1174533 28097733 ~ 28099214 (+)
G94245 NA non-coding downstream 12182 29286193 ~ 29286745 (+)
G94255 NA non-coding downstream 33089 29307100 ~ 29310853 (+)
G94260 NA non-coding downstream 48561 29322572 ~ 29323345 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding downstream 303145 29577156 ~ 29577403 (+)
G94310 NA non-coding downstream 376779 29650790 ~ 29651074 (+)
AMCG00017910 NA other upstream 626997 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 1576368 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 2276295 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 4221373 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 4558017 24705270 ~ 24715730 (+)
G94275 NA other downstream 159401 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 1545858 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 3133418 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 3187287 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 3233679 32507690 ~ 32601449 (+)

Expression


Co-expression Network