G94238 (pla2g12a,LOC108263807,LOC102792247)


Basic Information

Item Value
gene id G94238
gene name pla2g12a,LOC108263807,LOC102792247
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29269235 ~ 29273168 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117547
GTCAGCCTGCGGGACACAGACACCCCGGAACAGGAAGGACGGGCCGTCAACACACCGCGGACAGACTTCCTTCTCCGGCGGACGGACACCCCGCACACGGACTCAGTCGGCCGTCTAGACGATGTGACGATCGACAGCATTTGTTCAACATGGGGGAGGGCGCTCGTCTCCCGAATGTGCAGTTGCAATAAACCGTCGCCTGATTTGGAGTAACCTGCGCTAGCTGGGCGACTGACATGCGGGGCGTCTGCGTGGCGCTGCTGCTGTCCGCCGGGGTGGTCCTGTGCTCCTGCCAGGCAGCCCCCCGCGACCCGCAGACCCCGGACTGGCGCCTGACGCTCAAGACCATCCGGAACGGCGTCCACAAGATCGACACCTACCTGAACGCGGCGCTGGACCTGTTCGGGGGCGAGGACGGGCTGTGCCACTACAGCTGCAGCGACGTTTGACATCGGCATCCCCTCCATGACCAAGTGCTGCAACCAGCACGACCGCTGCTATGACACCTGCGGCAAGGACAAGCACGACTGCGACGAGGCCTTCCAGTTCTGCCTGGCGACCATCTGCAGGAACGTCCAGAAGACCTTGGGCTTGTCTCAGAGTGTCCAAGCCTGCGAGTCCACGGTGAGCCTGCTGTTTGATGCTGTCATGCACTTGGGGTGTAAGCCGTACCTGGACAGCCAGCGCGCATCCTGTATGTGTCGCTATGAGGAGAAACTGGACCTGTGAGGGGAGCCCAGGCTGTGAGGACTATTGACAACACGGCCAGATCTTTCTCTCGTGCCTTAATTAAGAGGACAGTGGGACGGTCATTCTTGATTCTTGATGTTGCTGACACCCAACGAAGGACAGTAACAGACTGTGAGGGACTGACACTGTGATTGCACCATTCTCTGCATTTATTCTTGTTATGTACAGACATTATTTTGTTGCTTGTCTGTTTTTAGTGTTCAATTTTTTTCTAAATAGTTTCTAAACATCTCACACTCTGTACCACATTTGAatagaagtaaaacaaattgtatCTAATATGCATTGTTGCCTCAAGGCAATAAACCTTTATTGTAATTGTGGTGGTTAAAACACACAGTGCCTTAATATGTACTTTAATTGTTACCCTGATATTCACTGCCAGATGGATATTGTCCAACATGATTGGGATAGTAAAGCAAAATGTGtctacagtgtgttgtgtttgtctgaaaataaatcttagTTGCTGATGATATCGTATCGATCTGGGACTGTTCTGTTGAGGGACCATAGTGTATcgtctgtctgtcagttctgtgtgCTTGGGATGGGGCAGATCTTTCTGGATCTGATTAAGTGAGCAAAACTGGATTCTGGGGTCCCAAAGGTTAACCCCACGTGAGAACAGGAGGGGTGCTGTGATTGGGGTCACAGGGAGCCAGAGATATATAGAGGTGCCTCAGAAGTGGTTTAGAGAGACTGAGCTCAGTGTGTCtttgaaagctgtttttttcccaGAAATAAACCTGTAGCAGGAATCCCGACTCTctctatttgtttgttgtttttgtccgGGGTGGATCCTGAAA

Function

symbol description
pla2g12a Predicted to enable phospholipase A2 activity. Predicted to act upstream of or within arachidonic acid secretion; lipid catabolic process; and phospholipid metabolic process. Predicted to be located in extracellular region. Orthologous to human PLA2G12A (phospholipase A2 group XIIA).

NR:

description
group XIIA secretory phospholipase A2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117547 True 1562 TUCP 0.51 3 29269235 29273168

Neighbor

gene id symbol gene type direction distance location
AMCG00017928 LOC100135902,LOC106610344 coding downstream 5702 29258505 ~ 29263533 (-)
AMCG00017926 lef1,LOC103361279 coding downstream 151593 29100508 ~ 29117642 (-)
AMCG00017925 lef1 coding downstream 177295 29079009 ~ 29091940 (-)
AMCG00017924 aimp1,LOC107684278,LOC107675933,LOC107729369 coding downstream 219838 29031879 ~ 29049397 (-)
AMCG00017918 NA coding downstream 417083 28846378 ~ 28852152 (-)
AMCG00017933 NA coding upstream 1726 29274894 ~ 29283831 (-)
AMCG00017935 NA coding upstream 15661 29288829 ~ 29304804 (-)
AMCG00017932 ttc39b,LOC106578215 coding upstream 33915 29307083 ~ 29332479 (-)
AMCG00017934 psip1 coding upstream 81871 29355039 ~ 29365548 (-)
AMCG00017938 NA coding upstream 252267 29525435 ~ 29527497 (-)
G94218 NA non-coding downstream 61431 29207470 ~ 29207804 (-)
G94137 NA non-coding downstream 533491 28733824 ~ 28735744 (-)
G94074 NA non-coding downstream 843992 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 848973 28419916 ~ 28420262 (-)
G94060 NA non-coding downstream 1172077 28093468 ~ 28097158 (-)
G94246 NA non-coding upstream 13039 29286207 ~ 29286747 (-)
G94337 NA non-coding upstream 638814 29911982 ~ 29914837 (-)
G94358 NA non-coding upstream 723081 29996249 ~ 29997513 (-)
G94359 NA non-coding upstream 725186 29998354 ~ 30002282 (-)
G94392 NA non-coding upstream 835803 30108971 ~ 30109182 (-)
G94172 NA other downstream 393312 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 1124646 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 1429445 27838251 ~ 27839790 (-)
G93796 NA other downstream 3159161 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 3161430 26104026 ~ 26107805 (-)
AMCG00017972 dcaf10 other upstream 1312561 30585729 ~ 30596417 (-)
G94543 NA other upstream 1354820 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 2986539 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 2998526 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 3012317 32285485 ~ 32308080 (-)

Expression


Co-expression Network