G94275


Basic Information

Item Value
gene id G94275
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29433412 ~ 29450347 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117593
CAGAGCTTCATCTCCAGCTTCGTGGACCTGTACCAGCTGGCCTGCTCCAAGATGGCCCAGCTGGAGAGCGAAGTGTCCTCACACCGGAGCCACATCACTGCGCTGAAAGCCGAGCTGCAGAGCGCGTGCCTGCGGGAGAACCAGGAGGACCTCTTCCCCATATCTGGAGCCACAGTGGGCGTCTCTTCAACTTCACCACCGAACACCTCACCCCAGCCCGGAGCAGACGCCTGGAGCGAGGCAGGAAACAGCCGGCCGGGCGGCCACAGCGCCGCGAACTTCGGCCCCCTGAGGGTGTccagaggaggagagaagacTTGGCAGAGCGGCCCCCTGTCCTCCGGCGCCAGAGCTGCTTTCACATCATCCACCACAATTACTaattaacaacagcaacaacaccgAGAGGACACACCATTAAAACGAGCATCTGAAATGATTTGTAGTTTTATACCAGGCAAACGTTATTTATAATATGAgtagattttatatttatatttttatatatacccTCTACATTTGACAAAAGAAGGTAAAAATGAGAGacatctttgtgtttttaaaaacatctatttgtatttgatgCTGATTATGcattccccccctcctcccaatTGTTTAAAAAGTGACACATTTTAGGTAATTTTCCAccaaccttaaaaaaaaaaaaatcaataagcCATTTTAGTCTCTATCTATCAAAGTTGTTTCATACTTGTCTGTTGTAAAGCGGGAATGCAGCACTTTAATAGGATCGCGGGagctatttgaaatgtatgccaATGATTCCTGTCATTTCATGGCAGCCCTGCCATGGTTCACTGAGCCCCACTGCTCTCTTGTCAGCCCGACTGGAGACGAGCATTTAGTTGCAAACTTTGAACAGGTTgtgcaaaacagaaatgatgTGACTGCTACCCCTCCTGCACCGCAATGTCACTCCTGGTCAGAGTGAGAAGGTCGGGCTGCGGCTCGTCTCGCTACACGGGAAACGCGCGCCCTTCTGAGCGCGGTCACCGCCGCGCCGCCGCTGTGTAGAGacgctctctctcccttcctcctgagcggtgtgtgtgtgcgcgtcgAGGGAGGGGGTTAAATTATAAACCTGCTGTTCATGAACTTCACAAAGACAGTGTCTCGTCCTTCCTCACCTCCCTGCAGCATCCAGATCATTTCTCTTTCCTTTGTGcgtttattttaatgatcatTATTTCGATTACAGTCTGATCCTTTCAGTCTCCCCCGTACGAGGGTCTAGGTAGGCTCCCTTTGTCTGTGGTACCCCAAGAGTGACGCCCATGTTTGACAGCCTACACATCAAGGCCATTGCCCTGTATTTTCTGCCTTGTAGCACACAAAAGTAAAATCGCTTGTCAGGCCGAGGTGTCGAGGAGCTGACAAGATGCCCCAGTGACATTTCAGCTCGAAAGAGCAAGTGTCTTGCAACCGAGTGgtcaaatatcaaataatagGTCAAGCAGGAAGGAGTTGAGTGGTATCCAGAAGGCAGTTTCTGGCAACTTACTTGACAAGCGCCCGGGCGCTCTGCGACTTAACAAAGTGATGTTCTGTTGGGTATTGTGAGACAGTCTGTTCCGTATTGCCTTCAAAAGATCAGACATTGACATTGATTAATCTCTTTAACCCCTTGAGCATGGAGACGGGGGTTTGCGGCGCGCCTGCCGGCAGGGCGAGTTCACCGGCTCTGTACGTAGAGCAGCACAGAGATATTCCACAGCTCATTAGAATATGCTGACCCCATCATCCTTGCAGTCACAGTGCATTCAGCACGGCAAGTTATTTGACTGTAAAACATAGATTCTTTCGCCCCGCGGTTCACACTGAATGCTCAAAACCTCCGTCTCCGAGGAGCTATTTTGCATTCGGAGGAATATTAATTTACAGAAACTGAGAAAATTAGATAAAGGGTTTTCTACGGCTGCAATTAGGGAAAAGGCAATTAGATcatctgtttgcttgtttttttctttattgtccTACAAAttaagcatgtttttattttttatttgctgtgcTCGTAAATATAGGGTCtccatttattaatgtaaattattttctcatgtgTAAATATAGGCTTCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117593 True 2106 TUCP 0.48 2 29433412 29450347

Neighbor

gene id symbol gene type direction distance location
AMCG00017936 NA coding upstream 16599 29368771 ~ 29416813 (+)
AMCG00017931 NA coding upstream 79525 29342195 ~ 29353887 (+)
AMCG00017927 NA coding upstream 175705 29250387 ~ 29257707 (+)
AMCG00017921 hadh,LOC107594428 coding upstream 372688 29056616 ~ 29060724 (+)
AMCG00017923 NA coding upstream 377885 29051154 ~ 29055527 (+)
AMCG00017940 LOC106610258,LOC102204558 coding downstream 290587 29740934 ~ 29756915 (+)
AMCG00017941 NA coding downstream 307207 29757554 ~ 29764700 (+)
AMCG00017942 NA coding downstream 356293 29806640 ~ 29833363 (+)
AMCG00017943 LOC108276379,LOC100698524,LOC102195089,LOC102797997 coding downstream 452468 29902815 ~ 29912178 (+)
AMCG00017946 NA coding downstream 503120 29953467 ~ 29954534 (+)
G94260 NA non-coding upstream 110067 29322572 ~ 29323345 (+)
G94255 NA non-coding upstream 122559 29307100 ~ 29310853 (+)
G94245 NA non-coding upstream 146667 29286193 ~ 29286745 (+)
G94236 NA non-coding upstream 159401 29273747 ~ 29274011 (+)
G94189 NA non-coding upstream 391468 29040010 ~ 29041944 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding downstream 126809 29577156 ~ 29577403 (+)
G94310 NA non-coding downstream 200443 29650790 ~ 29651074 (+)
G94348 NA non-coding downstream 527806 29978153 ~ 29980642 (+)
G94505 NA non-coding downstream 1088621 30538968 ~ 30544554 (+)
G94522 dcaf10,LOC102795877 non-coding downstream 1135363 30585710 ~ 30591176 (+)
AMCG00017910 NA other upstream 786662 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 1736033 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 2435960 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 4381038 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 4717682 24705270 ~ 24715730 (+)
AMCG00017978 NA other downstream 1369522 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 2957082 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 3010951 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 3057343 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 3339094 32789441 ~ 32793604 (+)

Expression


Co-expression Network