G94337


Basic Information

Item Value
gene id G94337
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29911982 ~ 29914837 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117670
CATGACTGTGTCTTGGTGTTTATTTCAATGagcaacattatatatatattttttcacatcaagcaattacattttttttttgtcatccggcagaggaaagaaaaaaaggaaaatatttgtgtgCAGCACAAaccattcccccccccccccccccccccccgattttctttactgtattttatatatctatatatccatacacagagagagagagatatagatatatatatatatatatacagacttTACCACGGTTACAAAAATAAGACAGCTAGATGCGTGACTGTACACACAgggtgaaaacaaacacaaaagtagCTGTACAGTCCTCATTGAGGGCAAAAATActcacaataaaatgttttaaaaaagaaagaaaacacggAAGGAGATGCCACCTCTCTAACTCAATGTGCCTCCTGTTCACACTGTTCCTGAACATCCCTCCAATgaacactggactgtattacataAAAGTTGTGCTtccctttttattaaaaagatcGCTGGTACTGTAGATGCCAGTTAGTTCGAGCTCAGCAATGCCACGCCTCTGTATAGGAATGACCTGACGTGATGAAATAAGAGACCCTTGCAAAATTGGATACTACGTAGTCTAGCAAACTAGGAGACCTCCCCAGatccccccccaccttcccaATCAACACAACCGacgctctctccctcctgcagACCAGCTTTAGTGGGAGGCTCTGTGACGCAGTGAACGGGTAGTGAGGCGAAACGTCGCGCTGGTGACTCGTTTCTCGGAGCCCAGATGCAAAGACAAAACATGCAGATCTGAGAGGATTTCCGTTCCGTTCCCCCTTCCTTTCTGtcttttgttgttctgtttttccatCCAGCAACTGCGTGTGTAGGCAAGTCCCCGAGTCATCTCTTGCAAACCCATCAATGCAGGTAACGAGCCCAGCGATCGTATAACGAGCCACTGGAACGAGGAAGAGACCCATCACAGAAGAGCTCACGCGATAATACTGGTGCCAGTGTGCGAATCTCCCAATCTTTGATAAAAAGttggaggggagaggggagtgTATTTtagggtgtctgtgtgtgtgacaaaacATGAATTTCCTGTTGAACTAAACAAAGTGTtacaaaaagtgtgtgtgtgtgtgtgtgtgtgtgggggtagGGGGGGGTGTGTCCCCGTGTGTACAGCTGGAGCCAATAAGACATTTGCTGGAATGTGTTGAGAATACACGGAGAGGATGGTGTGATGGCAGCACAGGAATGAAGCAAACTACGCACACCTCGGACCATGCTGAAACTTCCCACTGAAATTCATAAAACCGAggatggaagaaagaaaactcGTCTGGCCAGAGCTGGTACattaatcaaaggcaaaccccTTGAAAAAACccaccaacaaaacaaatttatatatatatatattataaaataaaaaagatgagtTTGATAAAATACTGGAAACAGATAACTCCGATAAATTGGTCCATGCTGCTAGgatctacacgtttagctctatAAAGCCTGACGGGATGTTTGACAGAGCTACAGCTTTCAAACCGCGACCTCTGAACCGTTCTCATCCTCATTTAATAAATTGGCCATGAGTACCATCACAGTCAAGATCTTCTACTCTACAGGTAACTAAGCATCTTTACTATCGGGGGCCGATCGCGGTCAGCGGACTAAACTAACATCCAGCCCAAACAAAAAGCCATGAATGTGACTACTTCCACAAACTCGAATCCTCCCGAAGGATGCAGAATAGAGCATCATTTCCCCAGACATAAGAATATActtgtaataaacttgtttagGTTCTGTTAGGAGCATTTTTTTAGTCGTCCCCCCACCCCAACTCCCCAAGCAGGGAATTAATTCTGTTTCTTGACAAACAATACGGAAAGACACCAACGTTATTAACATCATAATCTTTAGAGCACGTCAAAAAGGTGTGAGTCGCTTCGGCATACGCTATAAACTCAAGACATactctgtacattttgtttctttaaaaatagcCGACATCCCCATTTGTTCTCTAAaaacaggacaacagcttcgaATCCCCTGTGGACAGAGGTCGTGCATGGACTACGATGTGCTTTATAAACCGTTTCAAATAAAGGGTGAGAGCTAGCCTAGAGGAGGCCCAAGCGCCTCTGTGTCGGAGTGGGAGAAATCAATAAAGTACTTGTCATACCGAGCACAGATATGCAACACCTATTATTTACCACAATGAAGGAACAGCTAAATTTAGTCATAGAAAGATGCAGTGAGAGGAGATCAGGGTTTTAGAAGTCGTCAACTTTCCAGAAGAACATCccatccaaaacaaacacacatttatacttCTCATATAAACTGAAAGATTGTACACTGATGGTAACAGTTATCATAAAACCACaatgccacttttttttttttctttttttagtttttttagtttttttttcttcgtttGTAAGTTTCGGTTGCATTCGTATACGTGTACGTTTTGTCAGCCGTGGTCCCCCCGTCGTCTTCATCGCCCTCCTCACCGGTCATGTTGTCAAAGCAGCAGTGCAGATGGAGGAAGAAGCCAGTGCCCTAGTGGAGTGATGGACGTGCGTGGGCTTAGTGAGGGAGAGGGACCAGGATATCCACGTAGTTGATGGGGAAGAACCCCGACTGGCCGTGCAGCATCCCCTCGTACCAGTTGTCATCGATCTGGTTGGTCAGGGTGATGATGTCGCCCTCCTTGAAGCCCAGCTCGCCCTCGTTCTCTGGGTCAAAGTCATACAGAGCGCGGCAGCAGGGCTGGTCCATGGggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU117670 True 2810 lncRNA 0.44 3 29911982 29914837

Neighbor

gene id symbol gene type direction distance location
AMCG00017939 bnc2,LOC106933596 coding downstream 327550 29577109 ~ 29584432 (-)
AMCG00017937 bnc2,LOC107737408,LOC107737409,LOC107678088 coding downstream 367077 29538155 ~ 29544905 (-)
AMCG00017938 NA coding downstream 384485 29525435 ~ 29527497 (-)
AMCG00017934 psip1 coding downstream 546434 29355039 ~ 29365548 (-)
AMCG00017932 ttc39b,LOC106578215 coding downstream 579503 29307083 ~ 29332479 (-)
AMCG00017947 NA coding upstream 50662 29965499 ~ 29966626 (-)
AMCG00017944 trmo coding upstream 56253 29971090 ~ 29975805 (-)
AMCG00017945 NA coding upstream 61907 29976744 ~ 29983256 (-)
AMCG00017949 NA coding upstream 96473 30011310 ~ 30030524 (-)
AMCG00017955 NA coding upstream 197453 30112290 ~ 30112964 (-)
G94246 NA non-coding downstream 625235 29286207 ~ 29286747 (-)
G94218 NA non-coding downstream 704178 29207470 ~ 29207804 (-)
G94137 NA non-coding downstream 1176238 28733824 ~ 28735744 (-)
G94074 NA non-coding downstream 1486739 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 1491720 28419916 ~ 28420262 (-)
G94358 NA non-coding upstream 81412 29996249 ~ 29997513 (-)
G94359 NA non-coding upstream 83517 29998354 ~ 30002282 (-)
G94392 NA non-coding upstream 194134 30108971 ~ 30109182 (-)
G94483 NA non-coding upstream 541361 30456198 ~ 30461173 (-)
G94482 NA non-coding upstream 544712 30459549 ~ 30460888 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 638814 29269235 ~ 29273168 (-)
G94172 NA other downstream 1036059 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 1767393 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2072192 27838251 ~ 27839790 (-)
G93796 NA other downstream 3801908 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 670892 30585729 ~ 30596417 (-)
G94543 NA other upstream 713151 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 2344870 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 2356857 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 2370648 32285485 ~ 32308080 (-)

Expression


Co-expression Network