G94482


Basic Information

Item Value
gene id G94482
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30459549 ~ 30460888 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117857
TCTGCAGAACATAAACTGGTTATTCCTTTATTAACATGCATAAAATacagcattatttttttctgcactgCTGATGCTTATACACTCTGCAGCAATTCTCCATCCACACTGTCAGTTATgagcataaaatacattttcacagaccTCAGGTCTCTAACACTATTCAGAAAAGCTTACAAAAAGGTGGATGCTATCCCAGCAATGAGGTGATCCTTACAAGAAGAGGCTGATCGCGCATGGAGCATCCTTTTTTCGTTGGCATCTTCAGCACGTGTTAGAGCAAATGAGGCACACTTTTAGTCTCATAACCAAGGGACTGTGAAGGTATATTGGCCATTTAAGGACACATGCTCCATTAAAGAGTTCAGAACTTTGGGCGATTTTGGATGAAAACTACTTTTAGAAATTCAGAAAGCTGGTCTTGTCCAAGCTGGAGAAACTATCTTCTTGTAAGAGCATGTGAATGAATGGGGAGgggcaaaaaaaaaaatatggtcTGATAAGGGGAGCAGCCAAATAAGATAACCAAAAGAAACCAGTAATTTAAAGTTTATTCCAGCTATAATGCAGGTTGTTCCGACTTCCACAAGGTAGCATCACATTGCATACTTCTGAGTCCATTCCCGGGCTATTCTGTTGTACCTGTGTGGAGAGAAGACGTGGAAATTGAGCGAATCCCCGTCCAGAAAGCATCACACCACAGAAATTCTTATTTCCTTAAAGGCTGGTGGCAAGTTGTGCAAAAGCAGTGATACACATTATACAAGTCAGGTCAACACAGCAAAGATCAGCATATCGCCAAGTGCTCATTTCCAAACGTGTTCACACTGAATGGactgaatatttaaaagaaaaggctgAAAAAGCAAAATCATGGTGATCTTATGATGTCGAGAGTCAAATCGACAGCAGCTCAGTGGCACTGTTATACTTCTTACTAGCTCAGGAAGATCAGAGCGGGGATGTAGACAGTGACAGCACCGGCAGCTGTGGAGGCACTGAATACGGCCGCAATGTGGATATCTTAGGCGCCTGCAGACGTTCACCGGGAAGTGCTCTCTTGCGGCGGAGGCTTAACTGAGCTGGCAGCGTTACAGGAGCTGTAACGGGGCCGAGCGTAGCTTTAGGAGTGTGTGGACAACGGCAGGTGGCTGTCTGCCCAAAGTACAGTATGGATCACTGGCAGCCGTCTCCCATGAAGGGCACGCTTCCACCAGAAAAGGTGGCATTGACACGTCCTCACACCAGGCCTCTGTGCTTTTTTAGGGCTGAAAGAGGTGTGGAATGAGCGAGTGCTCGTATTATAGCATCTCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117857 True 1316 lncRNA 0.45 2 30459549 30460888

Neighbor

gene id symbol gene type direction distance location
AMCG00017963 cisd2,LOC106602754 coding downstream 19940 30432203 ~ 30439609 (-)
AMCG00017954 NA coding downstream 330235 30121865 ~ 30129314 (-)
AMCG00017955 NA coding downstream 346585 30112290 ~ 30112964 (-)
AMCG00017949 NA coding downstream 429025 30011310 ~ 30030524 (-)
AMCG00017945 NA coding downstream 476293 29976744 ~ 29983256 (-)
AMCG00017967 NA coding upstream 28588 30489476 ~ 30490828 (-)
AMCG00017966 nfkb1 coding upstream 30338 30491226 ~ 30514195 (-)
AMCG00017965 LOC107749781 coding upstream 78080 30538968 ~ 30580996 (-)
AMCG00017971 NA coding upstream 144625 30605513 ~ 30607128 (-)
AMCG00017977 NA coding upstream 197738 30658626 ~ 30722050 (-)
G94392 NA non-coding downstream 350367 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 457267 29998354 ~ 30002282 (-)
G94358 NA non-coding downstream 462036 29996249 ~ 29997513 (-)
G94337 NA non-coding downstream 544712 29911982 ~ 29914837 (-)
G94246 NA non-coding downstream 1172802 29286207 ~ 29286747 (-)
G94533 NA non-coding upstream 149933 30610821 ~ 30614319 (-)
G94563 NA non-coding upstream 257464 30718352 ~ 30721502 (-)
G94577 NA non-coding upstream 519007 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 918367 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 996991 31457879 ~ 31458254 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1186381 29269235 ~ 29273168 (-)
G94172 NA other downstream 1583626 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2314960 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2619759 27838251 ~ 27839790 (-)
G93796 NA other downstream 4349475 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 124841 30585729 ~ 30596417 (-)
G94543 NA other upstream 167100 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 1798819 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1810806 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1824597 32285485 ~ 32308080 (-)

Expression


Co-expression Network