G94483



Basic Information


Item Value
gene id G94483
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30456198 ~ 30461173 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU117858
TTGAGTATTGGTTTATGCAACTTTattgaggaaaaataaatcaataactagCAGAGCTATTAGTTGATCAGTCAACCATTGAGAGCTTTGCATCATTTATTCAGTGCTACAGAAAACAGTGTTGTGGAAGATAGATAAACTAATAGCTCCCGacttctaaaaacaaaactgaaaataaaaaacaacaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacacaattagacCGTTGGAAGAGATAGTTAAACGAAACACaaaaatgctttcataaaaCTTACTGTCATCCCCGACTGGACCCGCTGAACACTGTGCTGGTGGGTCACGTGCCAAATCGTTCAGCTCCTGGAAAAGAAGGTAAAGACTGTCAGAATCCAGGGTGCAGATGAACAGCAGCCATTTCATTCCTGTTAAACACCGTAGACTAGAACTCATTTTGCAagagttaaacaaaacaaattatgaacAAGAATGAGGTTTAACAAGATGAGACACTGACGTCCAGTATCACCAATTCACTGAACACAAGCACGCCGCATATCATACAAAGTGGTGGAAATACCGCACTAGGCATCTTCAGAAACCAGGGCTGAAATGATAGTCATTGATGGTATCTGTGCACTGCACCTGGGCCTAGACTTGGGGAAAGCAAGCCTTCTCAAAGCACACATCTCCACAGCATGCAAATCAAATCAACAGACAACCACCCACACTGGCAGCACTCCAGATACATCAGCACATGCGGCAGGCTGCAGACAGTACTGCGATTAGTTTTACATTAGATCTATTTATACACGGGACAGAAGAGAATGAAGAAAGCAGAAGTTCATTAGAATGCATGTTGTCCATCCAATTTAAGACACCGAGGTTGACTACATCCCATTACACTGGTgccaaatgtattctgaaatttttttatgaaaaagtGCTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU117858 True 958 lncRNA 0.38 2 30456198 30461173

Neighbor


gene id symbol gene type direction distance location
AMCG00017963 cisd2,LOC106602754 coding downstream 16589 30432203 ~ 30439609 (-)
AMCG00017954 NA coding downstream 326884 30121865 ~ 30129314 (-)
AMCG00017955 NA coding downstream 343234 30112290 ~ 30112964 (-)
AMCG00017949 NA coding downstream 425674 30011310 ~ 30030524 (-)
AMCG00017945 NA coding downstream 472942 29976744 ~ 29983256 (-)
AMCG00017967 NA coding upstream 28303 30489476 ~ 30490828 (-)
AMCG00017966 nfkb1 coding upstream 30053 30491226 ~ 30514195 (-)
AMCG00017965 LOC107749781 coding upstream 77795 30538968 ~ 30580996 (-)
AMCG00017971 NA coding upstream 144340 30605513 ~ 30607128 (-)
AMCG00017977 NA coding upstream 197453 30658626 ~ 30722050 (-)
G94392 NA non-coding downstream 347016 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 453916 29998354 ~ 30002282 (-)
G94358 NA non-coding downstream 458685 29996249 ~ 29997513 (-)
G94337 NA non-coding downstream 541361 29911982 ~ 29914837 (-)
G94246 NA non-coding downstream 1169451 29286207 ~ 29286747 (-)
G94533 NA non-coding upstream 149648 30610821 ~ 30614319 (-)
G94563 NA non-coding upstream 257179 30718352 ~ 30721502 (-)
G94577 NA non-coding upstream 518722 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 918082 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 996706 31457879 ~ 31458254 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1183030 29269235 ~ 29273168 (-)
G94172 NA other downstream 1580275 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2311609 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2616408 27838251 ~ 27839790 (-)
G93796 NA other downstream 4346124 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 124556 30585729 ~ 30596417 (-)
G94543 NA other upstream 166815 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 1798534 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1810521 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1824312 32285485 ~ 32308080 (-)

Expression



Co-expression Network