G94533


Basic Information

Item Value
gene id G94533
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30610821 ~ 30614319 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117916
TCTCTCAGCAAGTCATTTTATTAGAAACTAACCAAGTACAAAATTGAactgatttcaaaacaaaaggagaGACTTCACAAGCATTTCACAAAGTGGTCTGCTCTACAGATAGCAATTGGTAGTCACAggtcagtggatttctgcagctAGCACATCACTGCTTGCCATTGCCGTTGATGGGACGGTTCTTGTGCGCATCAGACTCCAGGAAGGCCTTTAATTTAGGGCGAGAATTCAGCCGCTCCACATAGCTCTTCAAAGTTGGAAGCTTATCCAGGCAGGTGGGGGCCAGAACCAGGTGATTTCTCAGCACATCCAGGAGGTTGTAGTCAGCAAAAGAAATTATCGCCTACTACAAAGCCTCCCTTATTGTTTAACAGGATCTTCTCAAACTTGGCAAGGTCATCAGGCAGGTCCTTGATATACTTGTCTTTACCAGTGTCCTACAAGAACCAAAAGGGGTAAACCAGTTACTAAAAGTCAGAACCTTCATACAAATGGTCAAAGTTGAGAACTCAAGCAGAGATGGTATCTAGAAGGGGAACAAAATAAGTTTGGAAGTGGAAAATTAAAGCTTACATATGTGGGAATGTGCAGACCATTAAAGTGCCAGCTAAATGATCAAGATTGCCAACAATGGGTAGGACACTCACAAACCAAGTAGTGCAGTTGAATAGATCAATTAGATGTCAGTTACACAAGGAGTCGGCAATAGATGGAGTGTTTGGGAAGTTCCAGAATCTGATCAGGCTGGTCTTTAAGCATTGTCAAGACCATACCCAAGGGCCAGAGGATCTTACAGTTCTCCCCTGTTGGACTGTAGCCCTTGGTGGTAGGATTACAAAAACATTGCCTGTACCCACAAGACTACTAGGGAACGAACATTAAGGCTTTGTGGCGATACTTACATACTCCTGGTAGATCAGTTTGACATATTTGAGTCGGAGGTCATGAACGCCATCATTCACCATATCAATGAGAGCCTTCTCCTCGTCATTCTTTCCATAAAGTCCTGAACAAGGAGAAGAACCAGATCAATTCTCtaagacaaaataaaccatCCCTACACATTGGGCAGAGGGGAAAGAATGGGCAAAACATACCATGTTTACGTCCCAGATATCTCAGTATAGCATTGGACTGGTAAAGGGTGAACCCTCCATCTTGAAATTTCGGCAACTGGCCAAACACCTAGAATATAAGAATGGACAGGAGGGAGGTGGTCTTAACACATTGGGTTTACTGGTTAGGCAGAGTTCATCATACGCTTAAAACCAAGAGCTTTAGAGTGGAAACCCCAACAAGACAGTCTATATGTGGTACAATTCATGTGGTATTGGGGTGTATATACAGATCCAGGATGTATTAGAGTAGAAAATTAAGTAGAAAGCCCATCAGTAATGAAAATGGTACCAAGGCGTAGACCAAATCAAGCTTTTAAGTTTACTATAAGTTGCAATTCCAAACTTAAACCTGTTTACAGGATATAGTAGCCTCAGTAAAGTGCAGTTGGGTTCAAGTTTAGAATGTGCTTTTATTGCTTGTGCAGAGGAAAACCAAAGTATAAAATCATGGTTCTCAACTCACACAGCTTGCTTTCAGATCTCCCTTGGTCCACATTTCAAAGTTCACTTCATTCTCCTTCCAGTCCAGGCCTTGGTCTGCCAGGAGACTCCTCATGGCCTCACCGAGCCCTGCCAACACAGAAGGCATATTGTAGAAAAACCCAATAACTACACCTCCTTCAAGCATGCAAgtgtaatggtttaaaaatgcaCCCTTCATTACAAGTTTTAACAAGCATTACAGCATTCCTCTGGGGCAATGTCCCCTAGCATCACCACTGTAAAAAATAGTGCAATGCCTTCCCTATACATTTTGGCTTCCATTGTGCTCTACAAATAGAGATGCGTGTAGTCAAGATGGATAAGTAGATGCAAAAGCAAtgatgttcatttatttatacattaggCTAAGCAAGGAAGTAATACAGACGCCTGCAGTACTTAGTCAATTAAGTTTATACAAACAGATTCAACGTACCTCGAACAGGGAAGTACGTGAGGGTGTAGGACGACACTGAAATAAGAGGAACAGAAACATTGAGCTGCAGGAGGCAATTTGCTGTAGCATCAGTACAGGTCAGTGTACACGAGAGACTGAAAAACCAGCCAGCAACCCGTTGTCTGCAACGAAGTTTAAGCAATTTGTGAAATCTAGGCtaatttcacaaaaaacaacattcatgtGGCATTTCTAGGACACAGGATTACAACACAGGATTTCACTTTGTAACCTCAGATGCAAGGACAAGTCTAAAAGTTGCCAAAACAATTGCCCAAGGCACCAAAGACAAATTAACTTTAACCTAATTGTGCAGATTTCCTTGGGTCCCATTTTAAATCCCAGATTAGGTCAGAGCTTGTATTGCAACTGGTCTGAATGGCTTTCCAGCTTCCTGAAAGCCACCCCCCTTAAAAAATGGCACTTTAAATTTCAGTCGCGGCTTTAACTGGTCTTCAAAGCAAGACCATACAGCAGGGTAACGGGCCGCAGTGCCAGGCTGCAGGCTCCAGGGTTGCGCTGCACTTTAATTGCCATCAACAACATCGCGCTTTGTGACGGCAGAACAATGATCCCAAAACTGGGTCAGTTATGCAACCAGGCGGCTAGTCCAAGAAGCGAAACGGATTATTCACCGTAACGGATTCGCAGACATGCAATCTAGATAAACCCTTGAATAACAGGTGGCACCTGGTTACCTGCAAGTGGCTTCAAGCCTACAGTGGGAAAATACTCAATCCCTGCAACAACTTGGTTATACACTTAAAATTGATGCAGTTTCACAGACGCCCTCGATTTAAGTTATGCACGAACACTTCCTTACGTCTAAAGAAAGTTCAAAAATGaacatgcatatatatgcatatatatatatttattaagagTCTGAATAGAAATTATGAATGCAAAAGAGCATTACAATTCCCCATTAACTGGCtgtgttaattaaatcaaaacagcgGCGAGCACAACTTACTTCTCGTTTTCGACCGCAGTTAATCAGCCGCTGCAGCAGGACAGAGGGAGTGAGCGCGATCAGCACACGCCGCCTTTATAGTCTCTGCTTACTTGGCATTTTGCTGAGTCATACTGACTTCACTACCCAAAAAGGGAGGAGAATAAGACTGAAAAAGAAATACGAGCAATTAAGCTTAGGCTACAGGTTACTGCACGGATTGGTCGGCTATGTACTCAACGCATATTTCATATCGAGTTGTGTATTGTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117916 True 3292 lncRNA 0.42 3 30610821 30614319

Neighbor

gene id symbol gene type direction distance location
AMCG00017971 NA coding downstream 3693 30605513 ~ 30607128 (-)
AMCG00017965 LOC107749781 coding downstream 29825 30538968 ~ 30580996 (-)
AMCG00017966 nfkb1 coding downstream 96626 30491226 ~ 30514195 (-)
AMCG00017967 NA coding downstream 119993 30489476 ~ 30490828 (-)
AMCG00017963 cisd2,LOC106602754 coding downstream 171212 30432203 ~ 30439609 (-)
AMCG00017977 NA coding upstream 44307 30658626 ~ 30722050 (-)
AMCG00017976 pigg coding upstream 130652 30744971 ~ 30776441 (-)
AMCG00017974 pigg coding upstream 196085 30810404 ~ 30811335 (-)
AMCG00017975 clg15h9orf72,LOC103354026 coding upstream 218474 30832793 ~ 30848229 (-)
AMCG00017979 NA coding upstream 366731 30981050 ~ 30982903 (-)
G94483 NA non-coding downstream 149648 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 149933 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 501639 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 608539 29998354 ~ 30002282 (-)
G94358 NA non-coding downstream 613308 29996249 ~ 29997513 (-)
G94563 NA non-coding upstream 104033 30718352 ~ 30721502 (-)
G94577 NA non-coding upstream 365576 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 764936 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 843560 31457879 ~ 31458254 (-)
G94600 NA non-coding upstream 902513 31516832 ~ 31517036 (-)
AMCG00017972 dcaf10 other downstream 14404 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1337653 29269235 ~ 29273168 (-)
G94172 NA other downstream 1734898 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2466232 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2771031 27838251 ~ 27839790 (-)
G94543 NA other upstream 13669 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 1645388 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1657375 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1671166 32285485 ~ 32308080 (-)
G94835 NA other upstream 1840766 32455085 ~ 32456410 (-)

Expression


Co-expression Network