G94563


Basic Information

Item Value
gene id G94563
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30718352 ~ 30721502 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117953
AACTATGGTGAAGGATGGGTACAGGGAAGTTTTTGCActatttacattatacatttaattaagcatCAGTCATATTCACCAATAGACGTCTGCAGTGGCTTCAAATCAGGTTTTCATGAAGaaaaagttatattaaaaaacctCCGTCGTGGTGCCATTTCTTAAGACATGAAACATACCATGACAAACTCGGACACCTAAATGTGGTTTTAACACTTCTCAGAACTACATAATTGCAcggttataaataataaaacattgttgttGGTATATATAAATAGGCTGTGTATAATGTGACATATATAGCTTGCTTATGTATAACTTCTCCCTCTGTGTACATGTTTCCCAATGTGGAATAAGCTTGAGTATTGTTCCTGTTTTTCTCACTGGCTTGTATGTTGTCTTTTACTTCTCTGTAACTCCACTTTCCTGATCCCtcatatgtatattattaccCCTCTAAAGGATAGCCCTCTGCATAAAGCTTGAGTAATCCATCTGTTTTAGGAACGTGTGCTTCTAGTTGCCTCAAGCCCgttgtgaatttattttgtgtttccaaCTCCCCCCGATGAATAACTAGAAATTGAACGTGTTTTGTTAAAAGATGGGATGGCTATATATTGtttggtggggaaaaaaagatcatggactgtttttaaatctgaatcAACGGTGTGTAGATATTTATGCGCTCTCTGTGAATAAGCTTCTAGTTCTGTAAAACACCTTTTCAGAAAGTACCTATGCAATCTACAGATGTATTTTGTACAGAGAGCTTTACGAGAACCTGTACGGAATTCATGTTCTTAtagagatttatatttattgcttaggatattttgttctttgtgtAAATAGGATTCATAAGAAAGAGAGACATGATACGGTAttgtaaaaacttttttttatcgCTCGAATGATACAGATCGAAGAAGACATAAATATTCTACGTCATCAATCGTAAATTCAGAACACCTGCGGGTGAGAAGGCAGTCAAATGTGCAAATATAATTTCCACGTCCGTAGCAATAACCAGGGGGACCTCTGGAGAATCTGCCACAGATATCGGCTTCATTCACACATATAATAACACGTTCGATGTGTTTTGCTTTCTGAACTAATCTGACTTCAGTAACGTGAAGCAATGTTCCAAACGGAGCACAGGGAGACTCTGTGCTTCTAAAGCACACTAATTCTCCATTCTGCTTTCTGTACTTCAGCTTCAGGAGGTTGTCATTTTGAGTAGCTGATGCCTTGACTGAGTCCCCATGGCTGGAGGTCCACAGGGAGCACCAGACACCTCTTGGTGCTCAGAGGAAATTGTTGGTGGGACTTGGTCTTTCTTCTCCCGATTGCTCCGCAGGGGGTGAACGCTAAAACAGGAAGCATCTCCCTCGTCCTGTGATCCTCTGAGCTATGCTGACTGAAGTTTCCACGGGTTCACTAGGGTCCGGACTGTATCCCGAGGACAACCCAATTTGccgtagcttttttttttttccttgtttgattgtttgcaATCCCAAATGCAGTTACAGGTGTTGTTTGATTTTTCTGAACTACATACTCATTCCAGGGGTGAAACCACTGTACAGGGACTTTTGTATTGAGGAAACAAAGTGGCTGTAGGCAAGAGATggacagggaaaaaaaatgagatTTTTGCATCAATGAAAGCTCTATTTCccttctggaaaaaaaaaatgtttcatatcaTTCCTGTGGTTTAGACTAAGTTTACTCCTCTCTGTTCAATAAACTGCAAGCACTCTTATTTATTCTTTCCTCTTTTAAGCGTTTGTGCCATTTTTGGTATTGTCTAGGGggctgtataatttatttatgctttgCAACACTTTTGatggttgattttttttattgcagatgTGTTTTGTCCTCTTCACTGggtttccaaaactgcagctttgTAAACCCTTCCCAAAGGCTTTGGTAATCTTTATCTTTTCGCAAACACAGGGCCATTTGGCATTAAAATGTCACTGCAAAAGAGTGACTGTGGTCTGTGCTCCTCCTCTTGGACTCGAAGGGAGTGTTTCTAGTGCTGCTTGTTTTtataacacactcacacaaaattATATGAGAACAAAATGGGCTGTTGAACAAGAAGAGGAGTCCCCTGCAGCCTCGCCAACTACTATCGTATTCAACATATAGTTCTTCATTCTCCTCTGCAAATAAAACCACTCGTGAAGTTGATCCGCTAATAGTATGGTAACTAATCCTTGTATGGTTATACATTTCAGGGTGTTTTCTATGCAAGAGGTTTTAATATCCTGATTCTCTGTGGAAAAACGTCTGCAAGAGGCATTATCCGGTTTTAACATTTGGCTTTGAATCAGAAAAGGGAAACGAAAATTTGCATGGCACTAATCTTTCAGTTTACTTTCAAATTAGCTTGCAAGCCCGCTGATCTACTTGcggcttttaaataatttatgcCTGCAGATGCATTTGAGATCATCTCATTGTTTGGAGTTACTGTGCATGAAGCCGGCGCTGCGCGGTAGCACAGGTTGACCAGAAAGTCACACAGTCCTTTACAATGATTCTGCTAAACAAAAACCGCAACAGTAGAGTGGGTTAGTGTGCATGACCAGtagtagtaaaaataataccaaaacaatctaataattataatgtacaaTGTTAATCATATGATAAAAGCTTGTCCTCCGATCACACACATGAGTACGATTCAACTTTGAGTAGTGCCTCTACTACTCTACTGACTTTTAAAACTTGTTCAGCTGCTCGATACATTGTGGTACTAATTCTGAATTGATGGATGAGACTTGGAGACAAGAGGCAACTCACCCGTCTGACTCAATATCAGTTTGTTTATAATGATCTCATTCTGTATTTTCACAAGTCCCCCCTACATGATTTCTTTTAAACTACTGAACTtccgttttttgtttgtttgttctgtttttaattgtagtCCTTGTTTTGATTGTTCTGGAGATCTGTGCATTGTACATCAtcttatattttcagttttgtttttgtctcccaCTCGAGTGATCTGTTTTTCATGATATGATTGGTTTCCAACAAAGCATCCTGGGAATTGATTTGATCAGGGGTTTCTGCGTTGTTGTGCAATGTTACAGTGGAAGACGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117953 True 3151 lncRNA 0.39 1 30718352 30721502

Neighbor

gene id symbol gene type direction distance location
AMCG00017971 NA coding downstream 111224 30605513 ~ 30607128 (-)
AMCG00017965 LOC107749781 coding downstream 137356 30538968 ~ 30580996 (-)
AMCG00017966 nfkb1 coding downstream 204157 30491226 ~ 30514195 (-)
AMCG00017967 NA coding downstream 227524 30489476 ~ 30490828 (-)
AMCG00017963 cisd2,LOC106602754 coding downstream 278743 30432203 ~ 30439609 (-)
AMCG00017976 pigg coding upstream 23469 30744971 ~ 30776441 (-)
AMCG00017974 pigg coding upstream 88902 30810404 ~ 30811335 (-)
AMCG00017975 clg15h9orf72,LOC103354026 coding upstream 111291 30832793 ~ 30848229 (-)
AMCG00017979 NA coding upstream 259548 30981050 ~ 30982903 (-)
AMCG00017983 eif4e,LOC107730661,LOC107696296,LOC105908755,LOC107680975 coding upstream 878156 31599658 ~ 31607699 (-)
G94533 NA non-coding downstream 104033 30610821 ~ 30614319 (-)
G94483 NA non-coding downstream 257179 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 257464 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 609170 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 716070 29998354 ~ 30002282 (-)
G94577 NA non-coding upstream 258393 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 657753 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 736377 31457879 ~ 31458254 (-)
G94600 NA non-coding upstream 795330 31516832 ~ 31517036 (-)
G94622 NA non-coding upstream 900098 31621600 ~ 31622378 (-)
G94543 NA other downstream 59859 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 121935 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1445184 29269235 ~ 29273168 (-)
G94172 NA other downstream 1842429 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2573763 28098905 ~ 28144589 (-)
AMCG00018000 slc1a1 other upstream 1538205 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1550192 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1563983 32285485 ~ 32308080 (-)
G94835 NA other upstream 1733583 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 1879687 32601189 ~ 32605751 (-)

Expression


Co-expression Network