G94577


Basic Information

Item Value
gene id G94577
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30979895 ~ 30980552 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117968
ctgCAATCTTTTAAAGCAATATCAATATGATACTGCTATAAAAGTTGAAATAAAGACGTCCCCTGTGTCACAATTTGGCCAGCCTTCACCTCACACATGACACTCAGATTGCTACCAATGGGAAAGGGCTTTAATACATTTCCAGTAGACTTTATTGATCATTAATTGGAAACCCTGGAAATAAAAAGCCTTGTGCAGTTTATGAACTCACCAGAGAATTAAAAcctttgtttgttggtttgtttatctATTGAAGAACAGCTGTCTAGAGTAAGTGAAATTTTATATCAGAAATTATAGTAGTTTctgggtttttaaaaataataaaatgccaaTTATTTTACTCAAGTTAAGGatagaatatatacattttattatattgcagATTACAACCTTCTTTTGatcactgtttttttatttttatgtttgtttttcttttgtcctTCTTGCCATCTTCCATTGTTTCTTCAGACTCTGACAGGTGAAATCCTAACGGCCTATTCCATGACCTGTATCCAGTTTCTGCAGTGAGATTACCATCATTTCCAGTTAGAAATTTGGAATTTGTTACACGCTGTGGTAGTTTctcatttttgttgttaaagCATTTAGATTgtgaaaagtacaaaaaaatgtatgtggaaTAAAGGAAATCCAT

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04911 Insulin secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU117968 True 658 lncRNA 0.32 1 30979895 30980552

Neighbor

gene id symbol gene type direction distance location
AMCG00017975 clg15h9orf72,LOC103354026 coding downstream 131666 30832793 ~ 30848229 (-)
AMCG00017974 pigg coding downstream 168560 30810404 ~ 30811335 (-)
AMCG00017976 pigg coding downstream 203454 30744971 ~ 30776441 (-)
AMCG00017977 NA coding downstream 257845 30658626 ~ 30722050 (-)
AMCG00017971 NA coding downstream 372767 30605513 ~ 30607128 (-)
AMCG00017979 NA coding upstream 498 30981050 ~ 30982903 (-)
AMCG00017983 eif4e,LOC107730661,LOC107696296,LOC105908755,LOC107680975 coding upstream 619106 31599658 ~ 31607699 (-)
AMCG00017984 adhx,LOC107379637,LOC106924987,LOC103137353,LOC106961688,LOC105936217,LOC103471823 coding upstream 642393 31622945 ~ 31644198 (-)
AMCG00017986 NA coding upstream 711775 31692327 ~ 31715433 (-)
AMCG00017987 ppargc1a,LOC106577610,LOC106608616 coding upstream 882177 31862729 ~ 31883678 (-)
G94563 NA non-coding downstream 258393 30718352 ~ 30721502 (-)
G94533 NA non-coding downstream 365576 30610821 ~ 30614319 (-)
G94483 NA non-coding downstream 518722 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 519007 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 870713 30108971 ~ 30109182 (-)
G94590 NA non-coding upstream 398703 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 477327 31457879 ~ 31458254 (-)
G94600 NA non-coding upstream 536280 31516832 ~ 31517036 (-)
G94622 NA non-coding upstream 641048 31621600 ~ 31622378 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding upstream 760672 31741224 ~ 31741659 (-)
G94543 NA other downstream 321402 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 383478 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1706727 29269235 ~ 29273168 (-)
G94172 NA other downstream 2103972 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2835306 28098905 ~ 28144589 (-)
AMCG00018000 slc1a1 other upstream 1279155 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1291142 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1304933 32285485 ~ 32308080 (-)
G94835 NA other upstream 1474533 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 1620637 32601189 ~ 32605751 (-)

Expression


Co-expression Network