G94601 (eif4e,if4ea,LOC103354029,LOC107085786,LOC107730661,LOC105908755,LOC107696296)


Basic Information

Item Value
gene id G94601
gene name eif4e,if4ea,LOC103354029,LOC107085786,LOC107730661,LOC105908755,LOC107696296
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31599760 ~ 31603112 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117996
atttatttacagtttgtaTTCTTTACACTGTATTGATATGAAAAGGGGCTGTGTTCTACTTGAGGCATCAATCAAAGCAAAGTATATCTTAAGGAATACAGGTCTTAAAATACAgcataacataaaacaaaaggcaTTTGTTATATCTTACTATTCTAGCAAGGAATGTAAAAATTACAggttacataataaaaaataaaaatcacaaaaaacataaaaaactttCTATTGAACCTCAAAAAACAAACGTTTAATTGTTAATACTTCaagaaaattaaagagaaagcaAATCACAAACGTTTGATTTCACCCATTTTAAGTCCCAGcccttcttaaaaaaaaaaaaataaagaacaaaaaaaggagCCGAGTTATAGAATTAAGAAAGCTATAACTCTTGGGGgagaataaatgaaataaattaaatgataatATTACTAGGGATTACAGCAAGAGCACTCAGTTGTacataaacaaaagcacaaagcaATATGAAAAGCTTGGACACGCTTCCTCCCAGGCCAACTCAAGCAGCAcacaaagctttaaaatatgaacacagTTCTTCGATCTAATGTTTTGAACGGCAACATTTCTGAAGTAAAGGTGAAACTGCGCAGCCACGGGACTCTGGAGGTCCGATACAACcaaaaacttgtttatttttgcttttcttttcgtgattttctttttaaatcagtcaATAATGGAAGAGCCTCTGACCAAtctaaatcaatgtatttattgaaatcgATAGACTGCAGTCCATTCTTCTCAGAAGAAGCTTTGTTTTAACCCCGATCTCGATCGCTTGACGGCGCCTTCTCAGAGAGGGAATCAAATTCTTAAACAATAAACTTATTCTTGGTGGTGGAACCACTTTTGGTGGCAGTGTCAGCATGAGACTGGTATCCAATTACCACTTTTGCTGGGACTCCTAATCTTTCCTTGTAAACCCTCctgtgggagaaaaaaaacatttaaaaaaaaattaagatacaaaacaagaaaacaaaatgattgttTCTCTGCTCAGAAATCCACAGTACTGATGTctattgcaatacaaatatcACAGATGAAAGGAACTTCTATGAAGAGAGTTAAATAACAAGCTGCTGAActattaaagcacattttacagcacaagTCTACTAATAAAAgcaagtttaaaaaacacacccaCCCTGCAGACCCTCGCTAGTGTGTAAGTGTTTCACAAAGTAAATTAAGCATTTACACACAAATGTATGGCATGCAACTTGAACACATCACTCAAGCAATAGTAAGCATTTGGACAGTACTGGTCCAGTCACTGCTGAACCGGGCAGCAGAATCAAACCTCTGCAACATCCATATCACATCAAACAACAGCTCGTGTTATTTCACTCGGAGCCTCTCACATGTTGTGAAGTGGACTTGCTGCCAAAGTACTTCAGCTGTGTTTAATGATACTTTCACTAATTATTAGACAAAGTAAGCCGTGTTCCTGTTGGGGGGAAAAGAAGCTGGAAAAGAATCTGAATTGTGCATATATTGCTCATCAACATTTTGGGCTTCCACTGTGCATTTTGTGCTGCAGGCCTGTCTAGCAGACCACTGggttcttcaaaaacaaactaaattaaatgaagatATGGGGGAAAGACGACTCACCCTATATGTGTAACAGCGTCCTTGTTTTCATAATCAGCTGTCCATATTGCTATTTTATCCCCTTTTGTTCTGATATTAACTACTGCGCCACAGACTTCATCGCTGTAGTCATCAAACGCTTCTCCTATGAGGCACAGGAGAGTTTCTAGCCAGAACCGATCCAAGTCACTTCTCCGCTGCTGTTTTGACAGAGTGATCAACCATCTTCCTCCCTTCTTGTTTCTCTCATCCTCCCACATGGGCTCAATGCCATCCTACACAACAACCAGTCTGTGCATTATTGCAGGAATAGGCTTGAAGCCCAAAGAACagcaatagaaaaacaaaacaacctagTGTTAAGAGAAAACTGCACAAAGACTACAAATGAAGCTGCCATGAATGTACACAAGAGGAAGAAAGGGGTGAGACCCCAAAGAGACCCCAGCGAGACGACCAAACATGACTAAACTACTGTGGTCTATATCATGTCAATGCAAAGCCATCGCTTCATTGTAAAGAACAGGTTCCTACCTTGAAAAGCGAATAGTCGCAGCCCGACATCAAATTGCTTGACAGCTGAATATGATTATAAAGACtgtaaatacacagaaataataTTAGATTAAAGGTGTAGACGATCATTGCCCCTGACTGGTACTGATAAGTGTAGTTCAGAAAGAGGAacgttttgttttaatcctacAAGTTCATTACATCTGTTCTTATGTAGTTTGTAGTAAAGGGATGAATAAAATACTGGCATCATAATTATTACTACTGACAGCACTTACTGTATAAACCTCTTTTTACTGTAATATTAAACAGGCTGTAAAAATCTATGTTCACAGATAGTTTCCTTCATATCCAACAAACAATATGATGGGGAAACCTACCCGAGAGACCAGATTTCCATCTGCTACATGGCAAAGTGCACCGCAAGTTAATTTGTAACTCTAATGGAAGCTGATTACAGCGGAGCGGCAGACAAACCACCGTTAAAGAGGCAGTGACAACAATGAGATGTCGAAAACAGGACACCGTTTGAAGACTGATGAGACACAGGTCTTAATTCAATTTCTCCTTCCTTTCAAGCAAAATGAACAGTTTTGTTTATGGAAGAGAAGGCCGGAAATAAATTTTTATTCTGAACGCCTTAACACACATTAGGagtaattacagttttt

Function

symbol description
eif4e Enables several functions, including DNA-binding transcription factor binding activity; RNA binding activity; and eukaryotic initiation factor 4G binding activity. Involved in G1/S transition of mitotic cell cycle; positive regulation of mitotic cell cycle; and regulation of translation. Located in cytoplasmic ribonucleoprotein granule; cytosol; and perinuclear region of cytoplasm. Part of RISC complex; eukaryotic translation initiation factor 4F complex; and mRNA cap binding activity complex. Implicated in autistic disorder.

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E-1A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117996 True 2822 lncRNA 0.38 2 31599760 31603112

Neighbor

gene id symbol gene type direction distance location
AMCG00017973 NA coding upstream 942836 30656133 ~ 30656924 (+)
AMCG00017968 LOC106604549 coding upstream 968525 30620823 ~ 30631235 (+)
AMCG00017969 NA coding upstream 985426 30611050 ~ 30614334 (+)
AMCG00017970 NA coding upstream 995517 30596996 ~ 30604243 (+)
AMCG00017964 NA coding upstream 1062296 30520635 ~ 30537464 (+)
AMCG00017980 ampm1,metap1,LOC107556924,LOC107733733,LOC106600494,LOC107695030 coding downstream 6106 31609218 ~ 31621106 (+)
AMCG00017982 NA coding downstream 42713 31645825 ~ 31649592 (+)
AMCG00017981 NA coding downstream 56789 31659901 ~ 31675037 (+)
AMCG00017985 NA coding downstream 137456 31740568 ~ 31745981 (+)
AMCG00017989 NA coding downstream 512049 32115161 ~ 32123373 (+)
G94599 NA non-coding upstream 82731 31516828 ~ 31517029 (+)
G94594 NA non-coding upstream 181640 31417849 ~ 31418120 (+)
G94591 NA non-coding upstream 204394 31395146 ~ 31395366 (+)
G94583 NA non-coding upstream 258928 31324524 ~ 31340832 (+)
G94555 NA non-coding upstream 877442 30718178 ~ 30722318 (+)
G94609 NA non-coding downstream 19344 31622456 ~ 31623543 (+)
G94613 NA non-coding downstream 25493 31628605 ~ 31629313 (+)
G94664 NA non-coding downstream 164524 31767636 ~ 31767848 (+)
G94668 NA non-coding downstream 256882 31859994 ~ 31864202 (+)
G94681 NA non-coding downstream 295390 31898502 ~ 31899680 (+)
AMCG00017978 NA other upstream 767893 30819869 ~ 30831867 (+)
G94275 NA other upstream 2149413 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 2953010 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 3902381 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 4602308 26992891 ~ 26997452 (+)
AMCG00018012 NA other downstream 804317 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 858186 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 904578 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 1186329 32789441 ~ 32793604 (+)

Expression


Co-expression Network