G94747


Basic Information

Item Value
gene id G94747
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32192183 ~ 32196606 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118171
TTGGAAAAGTACGTAATTTATTGGACAACTTTCAAAACATACATGTGCTTGCAAAATCCACTTATGCCTGACAACAAAAGCTACAGTCCATTTTTCCCCTAAATTAAACTCGTCTCATTGTTTCTCTTCTGTGCAAACACTCTGCTAGTGCAATTCTCTCCTTCAGTCCCTCAGAGAACTCGCCGTTCCtcgactctctctgtcctccgTGTCATCCATCTGCAGTCCAACGCTGCGGCACGACAACGTCGCCATCGTTTCGGGTGCGAGGGGTCGTCCTCCTCTCCGCCTGCTCCCCTGCTCATCCCTCTGTCCAACATGACTCTCACCCTCTCCACTTCTCTCCACTTCCCTCTCAACAGTCCTACCCAAACCATCACGAACCTCAGCACAACATTGTAAACACTTGACAGCGTGGATCAGGTTTAGTTTTTCATAAAGCAAGCATTGACATTCGtgtgttaatgtattaatgtattaatgggCCGAAATCGACAGCTACAGGACTCTGCTGTCGGGTTTGGGTAAAGTGTCATTTAAGTtccaaaaaaagaataatactaAAAGAAAGTCACTCCTTAATGCGAATGAGAACTTGAAccacaattcattattttaatcatcaGCGCAGAAACCTGGGCAAGAATGAGGCGTCAACACGTTTGCTTTGGCGGTGAATAATGTTCCAAAACTTTTGTAAACCTGCAACCTTCTTTCTGTGCATCAGTTAGTCTGGAAAAGTAACTCGACTCTCGCATATGTAATCGGTACAAATTGGCGAGAAGCTATTGAACACAAATCTCTCTTCGTATCCACCGGCTTGAGAACAAAGACTCCGCAGTGTAGATCTCACCACAGCCCTCGGTGTGTCGGGGAGCACCTCGGCCACAGTTTATCATTTGCATCGTATTTTAATCTCAGGATTGTTTTAAGCAAAACACACAACGGAAAATATTATAACAAGTACAGaagtttataaatataattcacCACTACTAACCAAAACAGGTGGCGTGTTTAAACTGCACGCTCTCTGAGCTTTGTAATGTTACCGTGCTTTTGGTAACTTAAAGTCCCCTCGTGATTTATCAGAAAGCTCTGAAGAAAACCCAGTTACTCCATTTCCCTTAGTTGCTgcatcaatcaaaacaaaccctttAATCCGTTTAATTGTAGTTACACAAATGTGTTCATTCAcgattataatattaataaattcacacacacacagctcatcctggattaaataaataaataaaatcatcttGATAAACGTGGCCGTTCGTTGTAACTTCGGTGTCGATCTAAAGATTTTTCAAGTGTAACGGACAGAGAAAAACCTGAGGTTGCAGTGCAAATCACACCAATGGTGCTCTGGAATTTGCTCAGGAAGCAGCTTCTACCAAGACAGACGCTGTTGCATGGACAGTTCGACTCACAGAGACTGTTCAACAATATTGACCTGTGTGCAGATAACAGACTGACCAGCAGTTCCACATACCTGCGCTTGGTTTTCAATTGAACAAACCTGATAGTAAGgatgatacaaataaaaagacagcAACCTATGCATACTCAAACAAGATCGATATAGGGCTTATAGGTTCTTACAAAATCTGCAAAAAGCACCACTGGTTTTAAGAGCAAGCGTGTCACATATTGGTAGCTTAGAAGGGTGAAGGGGACGGGTTttacttgttatttatttggttaaaaTGTTAAGCCTCAGTATTTCCCTTCTTTGGATCTCGTTCAGAAGCCTCCTTACTGTTCGTGACGAGACGTACAGCACAGCAGCTCAGAGACGAAGCACGCTCGTTCACGACACGCTGACGTGAGAAAAGGGCTCCGAGAGGCGGGGAATGAAATCTGCACCAGACGGAGCCAATGTGAAACACTGACCTCGATTCATTTAACTTTGATCTGGGAATGCTTTAAGAAAGTGTAAATTAAATCATTGTTGACTTGTGAATGTTTATGTGTCTACAGCTTATATTGActgatctatctatctgtctatctcaGAAACACTGGAAAGATGTTTGGTGTTTAGttcagtgaaatatatttgctCTTTTAAACAGTGTAAAAAGGCATGCATTTCATAGTGTAGTCagttcatataaaaataatctagcctttgttttagttaattgaagaaaaacaaaaccaaacaaaaaacattctgttctattatttagttttaatgtcGGCACATGAATGAGCTTGTTATTACTGGAAATAAGAGAGCTGCCCCCCCCCAGGCACGAGAGTCTGCATATCAGCTGAATGACACAAGGGGAGCGTCTGTCCGCGCCATTGTCATCATCACCGTCATCGTCGGCCCTGCTCCTGCCATTCAAGCGCAGCTTAGCCTGCCCCCCCGCTCTCCTGGGAGAGGGTCGTGTTCACGGGGATGGGGCCGAGGTCCCGCAGTCCTGCGCACTCCCCCCGTCGCAGTGGGGGGCTCTGCTCTGAGCCGTGGCCCATAGAGGAGACCGTCCCCTAGACGGCCACAGGCCCGGCTGCTCCCCAGCGCCTGGCGCTACTTGGACGGCTACTTCACAAGTAGACCCCAGGCCGGGCCCTGGCACGTCAGACACCAGAGCCACCAGGGGCCGCAGCTCTGGAGACCAACATGGCGGCCAAAAATCATGCATTATTGTTCACTTGTCGATTGTTTTCCCCAAGTGTCACAGGAATTGTGGCACAAGTACAGCGTTCTGTACTGGGAAAAAACCAACAACCCCCGGCCCTGCGCAGGACTCTGTGACCGCACCCCCGACCCCGCGGCGCCGACTGTCTTTCCAAGAAGAGCGAAAGGGGCGAGAGACTGACACTGAGGTTGAATAACAAGAACAGAGCAGATCACCATAATAGTCATGACAACACCGATTCAGACAGAGAGAAGACTCTAAGTCAAAAGGCCATTCGCCGCCCCCCCTCCACACAGAGCCTACACTTGCGCTGTGTCAGTCATCGCCGGGGCTGAAAGCAGGGCATAAAATAGCAGATGACTTGCAGCATGGGAAGTGGGGTGGCAATGAAAGCTGACCTGTGCCATCTTGCTATCTCTGCTCGTTTGGCCAGGGCAGCGCTGTAACTCAAGAGCGGCGGACATCTCGTCCAGCCGGGGCGCTCTGTACCGGCTCTGCGCTTTGAAGCGGCGCTGCTGCCCGGGGGAGGGAGCGGGGCAGTGCTGACTGGGGGGTAGTTTAATCTGTCTGCCACCGTCTTTAAAGGTGACTCCCATAAAAACGGCAAGGCACCCCGGGACTCTGCTAGAGAGAATGAAGCATATTAAGTGCCGAGTCGAATGTCTCTCTGCAGAGTGCAGTGTTAACGGTGCCAGTCAGGTTCATTAACTCAGTGTAATGTGCCCTTGAGCAAAGTGTGCTTGAGAAATAATACAGGGAggccaaagaaagaaagaaaaaaatctaaaattaagaaataaatagttttaatacTTTGATTTCTCGtgtaaaactgaacaaaatccACCAAATTAAGTCCACTTTGCTTCACATACGTTTACAGTGATTGTCAGAGTTGTGAGGTATTCATGTTAAAGATACAAGATCCTGAAAGTGCAAAGGGAAGACAGGATTGCTGAGGGTGTCTAAATGACAGATACgtctgtaaactgtaaactgaCTCAGAAAAGCACCATCAATGCAACTGGAAGAAACGAGGACAGTGGAAACTGACATTGGAGTATAAAGTATGCAAAGCTGTACTTTGActttgtttactgtatgtgcattttaatttactcaAGGATATTCCTTCCCAGCAAACAAGCGTTAAATGAACTGAGGGCAAATGTACAGCGGAAAACTTTCAAACTGTTTTGCGCGCGTGAAGAGGGACTCTTCTGTTCGGTTGCTGCCAATTCTAACGGTACAACGAGACCCGGGAGGGACTCCTATACAGTCAGTCTGTGCTTCAGCAAATGGTGGGTTTGGTTAACGGTAGCACACCCATCATGCGGAGAGATCTTACACTAAGGGAAGAGCATTTTAGGTTAGTTTTACATAAAAAACTGCCATTAAAAGATGCAAAATCGTCACAATAAAaccaattttaatttgttttgtttcattgtctCAATAAGTGCCTGAAATTTCAACTAGAATTAGATGCGAAGATGTATAAAGCAGGATGATATAGTTAACAGAGAAGAAGCAGCTGTGGGGGGGGCACAGTGTCAAAGATATATGCATGCTGCAGAGATTAACAAAACATCAGTTAAAAatttgtgggggtggggggggtgttcaGTAAAGCTGGTGAAACACAGGTTTCTGATGGAATAAGCGCagtaaaaaagagaaaaaaagaaaaagcctgaCAGAGTCACGCAATCTTCGGAATTGCGAGAAGATTCTTCATAACTTGC

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118171 True 4402 lncRNA 0.45 2 32192183 32196606

Neighbor

gene id symbol gene type direction distance location
AMCG00017994 NA coding downstream 18321 32164063 ~ 32173862 (-)
AMCG00017993 sepsecs coding downstream 28202 32155771 ~ 32163981 (-)
AMCG00017990 NA coding downstream 40507 32143816 ~ 32151676 (-)
AMCG00017992 ccdc149b,LOC105908379,LOC107671163,LOC107748825 coding downstream 51732 32123130 ~ 32140451 (-)
AMCG00017991 dhx15,LOC107691839,LOC107699613 coding downstream 80719 32088147 ~ 32111464 (-)
AMCG00017999 zgc:136353 coding upstream 3147 32199753 ~ 32210966 (-)
AMCG00017998 NA coding upstream 37245 32233851 ~ 32248178 (-)
AMCG00018006 LOC108437089,LOC103038323,LOC107561515,LOC107738333,LOC107691852 coding upstream 150889 32347495 ~ 32360816 (-)
AMCG00018009 NA coding upstream 183906 32380512 ~ 32381489 (-)
AMCG00018008 NA coding upstream 184944 32381550 ~ 32387686 (-)
G94665 NA non-coding downstream 363383 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 450524 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 569805 31621600 ~ 31622378 (-)
G94600 NA non-coding downstream 675147 31516832 ~ 31517036 (-)
G94598 NA non-coding downstream 733929 31457879 ~ 31458254 (-)
G94791 NA non-coding upstream 148644 32345250 ~ 32346583 (-)
G94927 NA non-coding upstream 593173 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 651660 32848266 ~ 32848466 (-)
G94543 NA other downstream 1533690 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 1595766 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 2919015 29269235 ~ 29273168 (-)
G94172 NA other downstream 3316260 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 4047594 28098905 ~ 28144589 (-)
AMCG00018000 slc1a1 other upstream 63101 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 75088 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 88879 32285485 ~ 32308080 (-)
G94835 NA other upstream 258479 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 404583 32601189 ~ 32605751 (-)

Expression


Co-expression Network