AMCG00018040


Basic Information

Item Value
gene id AMCG00018040
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9689 ~ 22355 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018040
GGTTTCTTCAATTTTGATATGGACTGTTTCAAGAAATATGGACGAATGTGGGGGTTTTATGATGGCAGGCAGCCTGTATTAGCTGTCATGGACACAGAAATGATAAAGACAATCCTGGTAAAGGAGTGTTATTCCCTCTTCACCAACAGAAGGAATTTCCGCCTCAATGGCCCCCTGTACGACGCGGTCTCCATCGTGGAAGACGAGGACTGGAGGCGGATCCGCAGTGTGCTCTCCCCGTGTTTCACCAGTGGACGACTGAAAGAGatgtttCCAATAATGAAACACTATGCTGACAACCTGGTACAACATGTACAGAAGAAAGCAGACCAGAATGAAGCTGTTCAAGTCAAAGAGTTGTTTGGTCCATACAGTATGGATGTTGTTACCAGCACAGCCTTCAGTGTCAACATTGACTCTATGAATAACCCCAGTGACCCCTTTGTGACCAACATCAAGAAAATGCTCAAATTCAATTTTCTAGACCCTATATTGCTAATCATAAGTCTCTTCCCCTTTGTTTCTCCATTGATGGAGAAAATGGAATTTTCTCTATTTCCAACATCAgtgacaaattatttttttgactCCCTTCGGAAAATAAAGACTAAACGCCAACAAATGGTTCATGATAATCGAGTAGATTTCCTGCAACTGATGGTCGATTCTCAGGTTCCAGATAAAGTGAATAACACCAAAGCTGAGCAGGAGTCTGTTAAAGGTCTGACAGATCATGAGATCCTCTCTCAGTCcatgattttcatttttgctgGCTATGAGACGACCAGCAGCTCCCTTTCCTTCCTTGCATATAATTTAGCCACCAACCCAGACTGTATGAAGAAACTGCAGGAGGAGATTGATCGAACCTTTCCAAACAAGGCCCCTGTGACGTACGAGGCAGTGACTCACATGGAGTACCTGGACATGGCCGTGAATGAGTCCCTAAGGCTGTACCCCCCCGCAGCCCGAGTGGAGAGGGTCTGTAAGCAGACAGTCAAGATTGGTGACGTGACAATTCCAAAGGGAATGGTCATCATGATTCCATCCTATGTTCTTCACCGCGACCCTCAGCTTTGGTCAGAACCTGAAGTCTTCAAACCAGAAAGattcAGTAAAGCCAACAAAGAAAGTACAGACCCCTATGCATTCTTACCATTTGGAGCAGGGCCCCGGAATTGCATTGGAATGAGGTTTGCCATCATCTTAATGAAACTCGCCATAGTTCAGATTCTCCAGAACTTCAGCATCATTACTTGCAAGGAGACAGAGATCCCACCTGAGCTGGATATTCAGGGATTCATTGGACCTAAAAAGCCACTGACACTAAAGTTCAGACAGCGCAGTTCATACCGTGCAGAGGAATAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005506 iron ion binding molecular_function
GO:0070330 aromatase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K17689 CYP3A4; cytochrome P450 family 3 subfamily A4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018040 True 1368 mRNA 0.45 11 9689 22355

Neighbor

gene id symbol gene type direction distance location
AMCG00018041 NA coding upstream 15327 37682 ~ 43087 (-)
AMCG00018039 NA coding upstream 22960 45315 ~ 128374 (-)
AMCG00018042 sdk1a,sdk1,LOC105890716 coding upstream 172666 195021 ~ 199235 (-)
AMCG00018048 NA coding upstream 450741 473096 ~ 481320 (-)
AMCG00018047 NA coding upstream 461682 484037 ~ 489046 (-)
G114030 NA non-coding upstream 446562 468917 ~ 472124 (-)
G114044 NA non-coding upstream 475972 498327 ~ 499518 (-)
G114166 ppl non-coding upstream 856956 879311 ~ 889088 (-)
G114179 glyr1,LOC107721499,LOC107688117 non-coding upstream 879965 902320 ~ 903843 (-)
G114183 NA non-coding upstream 890876 913231 ~ 913641 (-)
G114021 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 other upstream 418730 441085 ~ 442424 (-)
AMCG00018074 NA other upstream 755032 777387 ~ 800471 (-)
AMCG00018077 NA other upstream 899923 922278 ~ 926739 (-)
AMCG00018113 NA other upstream 1962794 1985149 ~ 2006636 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other upstream 1984551 2006906 ~ 2067584 (-)

Expression


Co-expression Network