AMCG00018053


Basic Information

Item Value
gene id AMCG00018053
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 513340 ~ 513737 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018053
atGCGCGGCACACCGCCCAGCACGGTGCACCAGAGGCACGCCGAGGGCCGCAGGGGGCAGGTCCTGCACAAGCGCGTCAGGGGGCCGGCAGCGGCAGCGGGCACAAGCCAGCTCCTCCGGCAGCCCGGCACCTCCAAGAGAGCCGCCTACGCCAGCACCAGGCGCAGGGCAGCCACAGACAACGGCGCCGGACAGGAGCTCCGGGCCAAGAAGGGATTGGACTGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018053 True 225 mRNA 0.72 2 513340 513737

Neighbor

gene id symbol gene type direction distance location
AMCG00018050 NA coding upstream 319 501542 ~ 513021 (+)
AMCG00018051 eif3b,eif3ba coding upstream 13874 490119 ~ 499466 (+)
AMCG00018043 gna12,gna12a,LOC107758336,LOC107703403,LOC107674729 coding upstream 45346 465505 ~ 467994 (+)
AMCG00018046 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 coding upstream 68290 440190 ~ 445050 (+)
AMCG00018045 gna12,LOC106593785,LOC106535814 coding upstream 82709 429053 ~ 430631 (+)
AMCG00018049 NA coding downstream 2799 516536 ~ 520955 (+)
AMCG00018057 NA coding downstream 61367 575104 ~ 575385 (+)
AMCG00018052 snn,LOC107703342,LOC107564698 coding downstream 64311 578048 ~ 578311 (+)
AMCG00018060 NA coding downstream 90593 604330 ~ 609917 (+)
AMCG00018061 LOC106607234 coding downstream 98752 612489 ~ 615795 (+)
G114018 NA non-coding upstream 41216 468788 ~ 472124 (+)
G114056 NA non-coding downstream 39473 553210 ~ 553504 (+)
G114205 NA non-coding downstream 649155 1162892 ~ 1178095 (+)
G114237 NA non-coding downstream 753103 1266840 ~ 1268893 (+)
G114253 NA non-coding downstream 776818 1290555 ~ 1291851 (+)
G114274 NA non-coding downstream 1019738 1533475 ~ 1534982 (+)
G114053 snn,LOC107703342,LOC107564698 other downstream 61523 575260 ~ 579704 (+)
G114123 NA other downstream 263646 777383 ~ 794790 (+)
AMCG00018072 LOC107720077 other downstream 357584 871321 ~ 889033 (+)
G114219 NA other downstream 706042 1219779 ~ 1220216 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other downstream 1434104 1947841 ~ 1949593 (+)

Expression


Co-expression Network