AMCG00018067


Basic Information

Item Value
gene id AMCG00018067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 617211 ~ 622245 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018067
GAACAAAGTTGACGTTGAGTTCCGGCTGTACGCGCTTGGcgatgtaaataatatatttctacaCAGGACCGCTTTCATACCGTCTAGCAATGATGTAACCCGCAACTCAGTGACGAACCACTTTTGAAAAGcCTGCTTAAATGTCCAAAACATGCCGCCCATCTGTGAGTGAAGAACCTGGCCTCCAGGAGGAGCCCTAATGACCCACATGCCCCTGACAGGAGATGGCGATCCTGGAGCCTTTTCCATTGATCCAGACCCCCCCGCCAGGGCGGCCGGCAGCCTGGTCTCCGAGAATGAGTTCTCCTGCCACTGCTGCTACGACGTCCTGGTGGACCCCACCACTCTGAACTGCGGGCACAGCTTCTGCCGGCACTGTCTGGCGCAGTGGTGGGAATCCTCACGCAAGAACGAGTGCCCGGAGTGCCGAGACAAGTGGGAGGGCTTTCCCAAAGTCAACATCCTGCTGAGGGACGCTGTGCTGAAGTTCTTCCCTGGGGACGTGCGTCGGAGGCGGGAGGAGATCCAGCTGAATCCCAAGATCACTCGCAGCCTCCAGGCCTTCAGGAAGTATGGGGAGGAGCAGGCCTCCAGGGGGGCCCGGCTGAGCGGCCCGCGGGTGCAAGGGGGCGGCTTCTTCTCTGGGGTCCTGACCGCTTTGACCTGCGTGGCGGTGATGCTGCTGGTGTACCACTGGAGTAGCCGGGAAGCAGAGCAGGACCTCCTGGTGCACAAGCCTGTGACTAAGTGGACCGCGGAGGAGGTCACCCTGTGGCTGGAGCAGCTCGGCCCCTGGGCTTCTCTCTATAAGGACCGGTTTCTGCAGGAGCACGTCAATGGAAGACTGCTGATGATGCTGGGAGATGAGGAGTTTTCTCACCAGCCTTACAGCATGGAGAACCACTCCCACCGGAAGGCTGTTCTAGCAGAGCTGGAGCGCGTCAAAGCGCTGGGGGTCAAACCCCCCCAGAACCTCTGGGAGTACAAGgcagtgAATGCCGGCAAGTCTCTGTTCCTGCTGTATGCTATGAAGAGCTCCCCCCGCCTCACCCTGCTCTACCTGTACCTGTTCGACTACGCCAACACATTCCTGCCCTTCATGCACACCTGCTGCCTCGGGGGGAAGGCCGACCCGGAGGAGGAGGACGTGCTGACCAAATCCCTGCTGGAGGAGCCCAGCTGGAGGCAGTGGACCGAGTTCCTGGTGAAGTTCTGCCTGTTGCCCTACCAGCTGATCGCCGAGTTCGCCTGGGACTGGCTGGCGGTGCACTACTGGACATCCCGCTTCGTCATCCGCATGTGGAGCCACTTCTGGAAGGTGTCGATGCAGGGCGTGGCCGTGGCGATCGTCTGGCCCGTGATCCCCCAGTTCGTCTGCAACTGCCTGTTCTACTGGGCCCTGTACTTCAACCCCATCATCAACATCGACCTGGTGGTGCAGCAGGTGCTGCGGCTGGACACCCGCATGCCCTAG

Function

GO: NA

KEGG:

id description
K15684 BFAR; bifunctional apoptosis regulator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018067 True 1474 mRNA 0.60 8 617211 622245

Neighbor

gene id symbol gene type direction distance location
AMCG00018065 NA coding downstream 7322 591793 ~ 609889 (-)
AMCG00018063 NA coding downstream 26389 579900 ~ 590822 (-)
AMCG00018055 NA coding downstream 51629 558522 ~ 565582 (-)
AMCG00018056 grifin,LOC107758328,LOC107592780 coding downstream 65971 546786 ~ 551240 (-)
AMCG00018054 NA coding downstream 79217 536678 ~ 537994 (-)
AMCG00018064 NA coding upstream 29042 651287 ~ 658508 (-)
AMCG00018066 LOC107682913 coding upstream 40004 662249 ~ 667911 (-)
AMCG00018073 si:dkeyp-72e1.9,LOC107601283 coding upstream 180475 802720 ~ 840922 (-)
AMCG00018078 NA coding upstream 267852 890097 ~ 901668 (-)
AMCG00018080 rogdi,LOC105899978 coding upstream 293595 915840 ~ 919384 (-)
G114044 NA non-coding downstream 117693 498327 ~ 499518 (-)
G114030 NA non-coding downstream 145087 468917 ~ 472124 (-)
G114166 ppl non-coding upstream 257066 879311 ~ 889088 (-)
G114179 glyr1,LOC107721499,LOC107688117 non-coding upstream 280075 902320 ~ 903843 (-)
G114183 NA non-coding upstream 290986 913231 ~ 913641 (-)
G114213 NA non-coding upstream 540645 1162890 ~ 1166493 (-)
G114264 NA non-coding upstream 646048 1268293 ~ 1268816 (-)
G114021 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 other downstream 174787 441085 ~ 442424 (-)
AMCG00018074 NA other upstream 155142 777387 ~ 800471 (-)
AMCG00018077 NA other upstream 300033 922278 ~ 926739 (-)
AMCG00018113 NA other upstream 1362904 1985149 ~ 2006636 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other upstream 1384661 2006906 ~ 2067584 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other upstream 1659455 2281700 ~ 2288862 (-)

Expression


Co-expression Network