Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018071 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 760423 ~ 760701 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060113 | inner ear receptor cell differentiation | biological_process |
| GO:0035315 | hair cell differentiation | biological_process |
| GO:0042490 | mechanoreceptor differentiation | biological_process |
| GO:0042491 | inner ear auditory receptor cell differentiation | biological_process |
| GO:0060563 | neuroepithelial cell differentiation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018071 | True | 279 | mRNA | 0.62 | 1 | 760423 | 760701 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018070 | NA | coding | upstream | 704 | 746675 ~ 759719 (+) |
| AMCG00018068 | axin1,LOC107564695 | coding | upstream | 21140 | 737140 ~ 739283 (+) |
| AMCG00018058 | NA | coding | upstream | 88587 | 667954 ~ 671836 (+) |
| AMCG00018059 | NA | coding | upstream | 98307 | 657682 ~ 662116 (+) |
| AMCG00018062 | NA | coding | upstream | 123336 | 622978 ~ 637087 (+) |
| AMCG00018069 | NA | coding | downstream | 2853 | 763554 ~ 777290 (+) |
| AMCG00018075 | glyr1,LOC107688117,LOC107590383,LOC107721499 | coding | downstream | 141483 | 902184 ~ 912776 (+) |
| AMCG00018076 | rogdi,LOC105899978,LOC107719995,LOC105899878 | coding | downstream | 158389 | 919090 ~ 921114 (+) |
| AMCG00018081 | uncx,LOC106601117,LOC106607339 | coding | downstream | 275649 | 1036350 ~ 1041531 (+) |
| AMCG00018084 | mafk | coding | downstream | 501328 | 1262029 ~ 1265534 (+) |
| G114056 | NA | non-coding | upstream | 206919 | 553210 ~ 553504 (+) |
| G114018 | NA | non-coding | upstream | 288299 | 468788 ~ 472124 (+) |
| G114205 | NA | non-coding | downstream | 402191 | 1162892 ~ 1178095 (+) |
| G114237 | NA | non-coding | downstream | 506139 | 1266840 ~ 1268893 (+) |
| G114253 | NA | non-coding | downstream | 529854 | 1290555 ~ 1291851 (+) |
| G114274 | NA | non-coding | downstream | 772774 | 1533475 ~ 1534982 (+) |
| G114299 | NA | non-coding | downstream | 1103856 | 1864557 ~ 1865570 (+) |
| G114053 | snn,LOC107703342,LOC107564698 | other | upstream | 180719 | 575260 ~ 579704 (+) |
| G114123 | NA | other | downstream | 16682 | 777383 ~ 794790 (+) |
| AMCG00018072 | LOC107720077 | other | downstream | 110620 | 871321 ~ 889033 (+) |
| G114219 | NA | other | downstream | 459078 | 1219779 ~ 1220216 (+) |
| G114320 | adap1,LOC108228240,LOC107388258,LOC102218716 | other | downstream | 1187140 | 1947841 ~ 1949593 (+) |
| AMCG00018105 | NA | other | downstream | 1212137 | 1972838 ~ 1973924 (+) |
