AMCG00018084 (mafk)


Basic Information

Item Value
gene id AMCG00018084
gene name mafk
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1262029 ~ 1265534 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018084
ATGGCGGgccgtgtctctgtgtctccgcGTCTCCGGGACGAGGGAACGTGGAGAACTCGTCTCTGTGAGAAGAGGCCGCCGGTGTTTACAGCTCTGCCGCACGCGGCTCCGCGCTCAGGCGGCCGGGACAGACCCCAGCTGGACCCCCGCGGTGACCGACCCCTCACTTGGCGGCAGCAGGTCTCTCTGTTGGAGCGCTGTGGCGAAGCGCAGATGAGCTCAGAGGGGCAGGCTGCCTCTGCCATGCGATTTCACGGTCTCTCGCTGACCTCTGCTGGTGGTTCATGctgctTTTCCGTGGAGTTCCAGCCCGTTGGATGCATACGGGGCATGACGACTAATTTTAAAGCCAGCAAAGCTTTAAAGGTAAAGAAGGAGGCCGGTGAGAACGCCCCCGCGCTCAGCGATGACGACCTGGTGTCCATGTCGGTGCGCGAGCTCAACCAGCACCTGCGCGGGCTGACCAAGGAGGACGTGGTGCGGCTGAAGCAGCGGCGGCGCACGCTCAAGAACCGGGGCTACGCCGCCAGCTGCCGCATCAAGCGCGTCACGCAGCGGGAGGAGCTGGAGCGGCAGAAGAGCGAGCTGCAGCAGGAGGTGGACAAGCTGGCGCGGGAGAATGCCAGCATGCGACTGGAGCTGGACGCGCTGCGCTCCAAGTACGAGGCGCTGCAGAGCTTCGCCCGGACCGTGACCCGCGGCCCGCTGGGCCCCTCCAAGGTGGCCGCCACCAGTGTCATCACCATCGTCAAGTCGGCGAACCACAGCGCCGGCGCCACGCCCTTCTCCACCCTGTCCTAGTGTCGATGGAATTAGGCTCGCCGTGGCCCGGGCCCGGGAGTCTCCGCTCTCCCCCGCTTGCCTGCCTGCGCCGAAGCGAGGCTAATTCTGTCAGCGCCCCGTCCAGCCCCTCTGTGCGTCTGTGCTATGACCCCCCAGCACCAGCAGGGCGATCACCTCCCCGTCGAGGACGCGCACTAAAACCCCCCCACACACGGCCTGGTCCCGGCCAGCGGTGTCCGGCGTTCGCACCCCTGACTTATCTTCAAGCAACTTCAATAAAACCACGACGGCACTGCGGCGATCAGACGCACTGCATGTCTGCCCTGAGGACGGAGATGCGGTTGTGCTTCGATCACCTGCAGTGAAGGTATCGGTCAGCAGTCAGACCGGCCtgaacacatttgtaatttcaatttaattactCTTCTAAAGACATTGGTCTCCGAATCGCTCCTGATCGCTGACCAGACGGCAGAGTGTGACATAAAGTGACAGAGTGGGTTATAAAGAGGCTTCAAGTTTACAGAGCCTTTGACAACCAAGTAAGTTAggggaaattaattttatttcacattataaatacattaaacacattttgtttcagttactCTGACAACTGGTTGCTGCTGGATAAATATCAGATGTTACTCCCGAAGAGGCACTTACTAGCTTACTGTTAAAACAGGACAGAAACAGCACTTGCgcaaaacttatttttatatatatatgtatatgttgtaaAGAAGCTACACGGAGGGGCCCTTCGCACCTCCGCGCTCGAAACGACACCCGTTAGTGTTCTGACATTCGAATCGAATTAAGGTCGGAAATCGAAGCGCTGTGCTTTATCGGAACGTGATGAACGCACGGTTTCGTACGATCGTGATAGtttcatggtttgtttttcttctctgaaCACTCTGCTATCAATGCCATAGTTCATGGTGGGTAATCCATATTGGATATAGAGCTGAGGGGAGACGCCTTGACAGATGCACAGACAGcaacacaaactaaaataaataacacccaATATTACCTGTATATTACAGATCAATGACACTTCCTTTGATTCATTTTTAAGAGGAAAACTCAAACCTGACACCTCTTTCCTGAAGTTTTGTCCCCCGGACGGCATGCCTCCACTCTGGTCTCCTTCGCTACACTGCCGGTGTTTCATATGATGTCATTCGTTTTGGTCGTACTGTAATATTTCGATGCGCACACGAGGGTGAAGAGAGTCCTGAAGGTGGACTCCGGTCTCCAGAAGCATTTTAAGGAGAAACCACCTCTGTGAATACTAGATTTGAGATGAAgccataaagaaaaacaatgatcGTCATTATAAAAATAGTAATCGTAGTTGTCGATCTTTTCTTCAAATATTCCAGGCAAATATCCTCAAAACGTCAAGAAAATTGTTTGTAAACTTAATCAAATCAGTTTTACACAAGTTCCCACAGACACCAGTCAAACCGTAGCCACCAAACCCCATTACAGGCCCCTGAAAGGGCAAACGAACCAGAAACCAAAACGACGCCAGACATGACGCAAAAAGATCCGTTCTGAAGGCAACTTAAAACGGATTCCCAGCTTGGGGGTCTCTCTCGCCCGGTGGAAAACGATGGCGCTTCCTCGTCTCCAGACAGGGTTACGAGAGTTTGCCGCTCGATGGCCGATGGCAGACCCAGGCCGTTGCTGTGCTCTTATCGTTATCATTTCGCATTTCCCGATTCATTTCCAcatgtgctgttgtgtttttcgGAGTGTGTTTCTACTCTCGGGCAGGGAGGATCTTGTGACGGACCCCCCAGGTCAGGACAGCCATTCTTATCTGACAGAGAAGGCCTCTCGTGGGTCGTGATTGTGATGCCTGTGTTTGGGAGACGTGGTTGTGTTAACGCCACTTCTGCTGAGGGGTTAATGCCAGACGAAGCACTCGTCTAGTTTCGATACAGATCTTCATATTCCTGGAAGCTGATCGCACGTTGCATCAGAGTTCGTCCTCCTCGGTCTGTCCTCAGACTTCATGAGTGTTTACACACGGACAGACTGATGCACTTCTATACCTGCATTAATACACACACCTgtacgga

Function

symbol description
mafk Enables protein heterodimerization activity and transcription cis-regulatory region binding activity. Contributes to DNA-binding transcription factor activity. Acts upstream of or within positive regulation of transcription, DNA-templated and transcription, DNA-templated. Part of transcription regulator complex. Is expressed in exocrine pancreas. Orthologous to human MAFK (MAF bZIP transcription factor K).

NR:

description
PREDICTED: transcription factor MafK

GO:

id name namespace
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K09037 MAFF_G_K; transcription factor MAFF/G/K

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018084 True 2879 mRNA 0.53 4 1262029 1265534

Neighbor

gene id symbol gene type direction distance location
AMCG00018081 uncx,LOC106601117,LOC106607339 coding upstream 220498 1036350 ~ 1041531 (+)
AMCG00018076 rogdi,LOC105899978,LOC107719995,LOC105899878 coding upstream 340915 919090 ~ 921114 (+)
AMCG00018075 glyr1,LOC107688117,LOC107590383,LOC107721499 coding upstream 349253 902184 ~ 912776 (+)
AMCG00018069 NA coding upstream 484739 763554 ~ 777290 (+)
AMCG00018071 NA coding upstream 501328 760423 ~ 760701 (+)
AMCG00018091 elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding downstream 243460 1508994 ~ 1511372 (+)
AMCG00018097 nudt1,8odp coding downstream 483695 1749229 ~ 1752065 (+)
AMCG00018096 NA coding downstream 504622 1770156 ~ 1779659 (+)
AMCG00018104 NA coding downstream 530868 1796402 ~ 1802228 (+)
AMCG00018102 ttyh3,LOC106607330,LOC106601124 coding downstream 545901 1811435 ~ 1846910 (+)
G114205 NA non-coding upstream 83934 1162892 ~ 1178095 (+)
G114056 NA non-coding upstream 708525 553210 ~ 553504 (+)
G114018 NA non-coding upstream 789905 468788 ~ 472124 (+)
G114237 NA non-coding downstream 1306 1266840 ~ 1268893 (+)
G114253 NA non-coding downstream 25021 1290555 ~ 1291851 (+)
G114274 NA non-coding downstream 267941 1533475 ~ 1534982 (+)
G114299 NA non-coding downstream 599023 1864557 ~ 1865570 (+)
G114321 NA non-coding downstream 684727 1950261 ~ 1950500 (+)
G114219 NA other upstream 41813 1219779 ~ 1220216 (+)
AMCG00018072 LOC107720077 other upstream 372996 871321 ~ 889033 (+)
G114123 NA other upstream 467239 777383 ~ 794790 (+)
G114053 snn,LOC107703342,LOC107564698 other upstream 682325 575260 ~ 579704 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other downstream 682307 1947841 ~ 1949593 (+)
AMCG00018105 NA other downstream 707304 1972838 ~ 1973924 (+)
G114330 NA other downstream 711470 1977004 ~ 1978727 (+)
AMCG00018106 NA other downstream 713512 1979046 ~ 1982566 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other downstream 982319 2247853 ~ 2266775 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026693 mafk coding NC_007114.7 CM002887.2 42964045 ~ 42981739 (-)
grasscarp (Ctenopharyngodon idella) G196108 NA misc CI01000046 null 2439917 ~ 2445456 (+)