AMCG00018100


Basic Information

Item Value
gene id AMCG00018100
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1739851 ~ 1745900 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018100
GTGGTCCATGTACTGGAAATAAACCAGTGCACCCGACTGGGCCGCTGTCCGGCAGCACAGCACCACCGGGCCCCAGGCAGCGTGCGTCTCTATCCGTCCGCTCACATGCGCAGTGCCGTCAGAACCGAGCCGGTGCTGCATGGCCAGCCAATCCCCAGCAGCACAGAGGCCTTGAGACCGGGCACCATGGACAGTATGGAGGACAACACCACTGTCTTCACTACGCTGAAGTCCTTCAAAACCTTCCTCTCTCAGCACGAGGCGTCGCAGAGCCTGTCCGAGTCCAGTGTGTCCAAGAGCGATATGCAAATGCAGTTCAACCAGAGACTGCAGCTGGAGGAGGCGGCCGAGCGGATCCAGTCCAAGACCCACCTCCTGCACATGGACCAGGAGAAGAAGCAGATGGAGCTGAGCCACAAGCGCGCCCGCATCGAGCTGGAGAAGGCGGCGCACAGCAGCGCCCGGGACTTCGAGCGTGAAGTGGACCGGAACCAGGATCTCCTGAACCGCATCAGGAAGCTGCAGGAGAGCGTGGCGGAGGCGGAGCGGGTGAAGAAGGAGCAGAGCGACGCCAACGGGGCCCTGCAGAAGACCATCGAAGGGCTGTGCAAGAAGCAGGAGGAGAAGGACTCCCAGCTCGTCGAGGCCAGCGAGACGGTCCGAGCCCTGAGAGACGAGATCCGCGAGCTCAACCACAAGCTCAAGAGCCAGGAGATCCAGCTGACCACACAGACCACGGAGATGCAGGGCCTGCGGGAGCAGATGGACTTACAGCGCCAGAAATATCAGGAGGCCACGCAGAAGTGCCAGCTCCTCCAGACGTGTCAGTCCCAGAACTCTGAGAACGAGCTGAAGATCAAGGAGCTGGAGCGCCGGCTGGTGCTGCAGGAGCAGGACTCGGTGATCGTGAAGAACATGCGGACTGAGCTGGCCCGGGTCCCGGACCTGGAGCGGGACCTGAGGCGGCTCCGGGAGGAGAACAGCTATCTACGAGAAACCAAGGAGAACAACAATCTGCTGAAGGAGGAGGCGGAAGGCATGAGGAGGAAACTGCAGCGTCTGGAGAAAGTCAAAGAGGACATGGTCAACCTGGAGCTGGAGAAAGAAGCTCTCTCCGCCATGCTGACGGGGTCTTCGCACCTCATCACCGAGGCAGGGTGA

Function

GO: NA

KEGG:

id description
K06679 MAD1; mitotic spindle assembly checkpoint protein MAD1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018100 True 1161 mRNA 0.61 9 1739851 1745900

Neighbor

gene id symbol gene type direction distance location
AMCG00018093 NA coding downstream 61506 1677834 ~ 1678345 (-)
AMCG00018095 NA coding downstream 76692 1639671 ~ 1663159 (-)
AMCG00018094 mad1l1,LOC107722950,LOC107714125 coding downstream 112683 1626754 ~ 1627168 (-)
AMCG00018092 NA coding downstream 202121 1536967 ~ 1537730 (-)
AMCG00018089 NA coding downstream 441917 1295566 ~ 1297934 (-)
AMCG00018098 NA coding upstream 250 1746150 ~ 1748581 (-)
AMCG00018101 NA coding upstream 2845 1748745 ~ 1749020 (-)
AMCG00018099 NA coding upstream 10764 1756664 ~ 1769934 (-)
AMCG00018103 lfng,LOC103392616,LOC106537334,LOC101169038 coding upstream 114613 1860513 ~ 1874199 (-)
AMCG00018108 adap1,LOC106601846,LOC105005621 coding upstream 202089 1947989 ~ 1970490 (-)
G114286 NA non-coding downstream 204866 1533456 ~ 1534985 (-)
G114273 NA non-coding downstream 226209 1512993 ~ 1513642 (-)
G114264 NA non-coding downstream 471035 1268293 ~ 1268816 (-)
G114213 NA non-coding downstream 573358 1162890 ~ 1166493 (-)
G114183 NA non-coding downstream 826210 913231 ~ 913641 (-)
G114304 NA non-coding upstream 5996 1751896 ~ 1878375 (-)
G114363 NA non-coding upstream 237752 1983652 ~ 1984149 (-)
G114456 NA non-coding upstream 622530 2368430 ~ 2375735 (-)
G114554 NA non-coding upstream 922560 2668460 ~ 2668661 (-)
G114658 NA non-coding upstream 1250135 2996035 ~ 2998258 (-)
AMCG00018077 NA other downstream 813112 922278 ~ 926739 (-)
AMCG00018074 NA other downstream 939380 777387 ~ 800471 (-)
G114021 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 other downstream 1297427 441085 ~ 442424 (-)
AMCG00018113 NA other upstream 239249 1985149 ~ 2006636 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other upstream 261006 2006906 ~ 2067584 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other upstream 535800 2281700 ~ 2288862 (-)
G114549 LOC104962440 other upstream 863245 2609145 ~ 2609479 (-)
AMCG00018142 NA other upstream 890601 2636501 ~ 2647811 (-)

Expression


Co-expression Network