AMCG00018125


Basic Information

Item Value
gene id AMCG00018125
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2302964 ~ 2305444 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018125
ATGGCTTCACCGCAGCGACAGAAGCTGCTTTTGCACCACACGGAGGTGATTTGCGATTCTGGTGGAGACGGAGTGTCAGTGAAAATTAACAGCAAGCCGAAGATGCATGGCCCAgcgagcagcagcagcagcgccggCGGCGGCTCCAAGCACTGCAAATACAGCATCTCCTCCAGCTGCAGCTCCGGGGAGTCGGGGGTGCGCAGGACTGCCGTGTCTGGGCTCAGGAACCAGAGGAAGGTCCCCCAGCTGTTCGAGAGGTCTGCCGCTCAGTGGTGGGACCCCGGCTTCGACTCCCCCATCCTGGAGGAGGCCTGCCGGGAGCGGTGCTTCCCCCAGGCGCAGCGCCGGTTCCGCTACGTGCTCTTCTACCTGCTCGCCGCCGGGCTGCTCTGGGGCGTCTACTTTGGGGTGAACCACGGCCGCTGCGCCCCCCTCGCCTTCCTGGTCCCCACCGCGGGCTTCCTGGTGTTCTGCTCCCTGCTGTTCCTGTTCACCTTCACTCGCTTCTACGCCCGGCTCCACACCCAGGTGTCGTTGCTCCTCATCCTGGTCACTTTCGCCCTGACCTTGGCCCCCCAGATCCAGACCGCCGCATTCTCCGACCTGGGCATCGAGGACGTGGACAATGGCTTGGGCAACAGCTCCATCGCCAGCTCCGGCTCCGGGTCCCTTACCCCCTGCATCTCTCCCGTGGGAACCTTCTCACTGTGCATGGaggtcctgctgctgctgtacagCGTCCTGCACCTGCGGCTGTACGCGTCCGTGCTGCTGGGCCTGGTGTACTCCATCCTGTTCGAGACTCTGGGCTGTGTCGCTTTGGCCCACGACGGCCAGGCCTCCGACACCCTGTACTGGTTGGCGCCCGGCAAGGCCCTGCTGCACCTGTGTGCCCACGCCATCGGCATCCACCTGTTCATCATGTCGGAGGTGCGCTCCCGCAGCACGTTCCTCAAGGTGGGCCAGGCCATCATGCACGGGAAGGACTTGGAGGTGGAGAAGGCCCTGAAGGAGCGCATGATCCACTCGGTGATGCCCCGGCGCGTGGCGGACGAGCTGATGAAGCAGGGTGACGATGAGAGTGAGAACTCCGTCAAGCGCTACTCCACTTCCTCCAGCCccaagaacaagaagaagaagacctCCATCCCGCGGGGCCAGATCATCTTCCGGCCGTTCAACATGAAGCGCATGGAGCCCGTCAGCATCCTGTTTGCCGACATCGTGGGCTTCACCAAGATGAGCGCCAACAAGTCCGCCCACGCCCTGGTGGGCCTCCTCAACGACCTATTTGGCCGCTTCGACCGGCTCTGCGAGATCACAGAGTGTGAGAAGATCAGCACGCTGGGCGACTGCTACTACTGCGTGGCCGGCTGCCCCGAGCCCCGCGATGACCACGCCTACTGCTGCATCGAGATGGGCCTGGGCATGATCGCGGCCATCGAGCAGTTCTGCCAGGAGAAGAAGGAGATGGTGAACATGCGCGTGGGCGTGCACACGGGCACCGTCCTCTGCGGCATCCTAGGAATGAAGCGCTTCAAGTTCGACGTCTGGTCCAACGACGTGAACCTGGCCAACCTCATGGAGCAGCTGGGGGTGGCGGGCAAGGTGCACATCTCTGAGGTCACCGCCAACTTCCTGGACGACCGCTACGAGCGCGAGGATGGCCGGGTGATGGAGCGCGTGGGGCAGAGTGTGGTGGCGGACCAGCTGAAAGGTACAGTGGGGCAGATGGGGGTGGGTCGTCAGGCTGTACTATACACTCCAAGTATACTGCAGGCGGGTGTTGATTTGAACCAGGCCTGCCTGTTAGTGTGGCGCCTGAATCCCATCACAGCTACAATGCGTAAGATGGAGGCGCCACTTCATTTGCAGTCCCGTCCGTCTCGCCCAACGTTTCGCTTCCTCTCACAATGGTTCCCGCGGGCGGCCTCGGTGCCCGGTGTCGGTCCCGGAGATGCTGGGCCTCGGAGACGCCCTGTATTTGTGGTAACGTCGTCTAGGGTGGCATCGTCCGGCTCATGCGTGTCGCCCCGGGGGAGAGACAGGGCCCAGGCTGCGTCAGTTTCCGACTCTGAGGCATTAGGTAAACGCTCACGGATTGCCGCACAGGCCTTGCCGTGGTATTGA

Function

GO: NA

KEGG:

id description
K08049 ADCY9; adenylate cyclase 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018125 True 2133 mRNA 0.63 2 2302964 2305444

Neighbor

gene id symbol gene type direction distance location
AMCG00018124 srl,LOC107661647,LOC107718567,LOC107553668,LOC107695714 coding upstream 11204 2281697 ~ 2291760 (+)
AMCG00018120 LOC106601835,LOC107695711 coding upstream 90040 2211509 ~ 2212924 (+)
AMCG00018121 NA coding upstream 99634 2200435 ~ 2203330 (+)
AMCG00018116 NA coding upstream 184174 2116615 ~ 2118790 (+)
AMCG00018114 NA coding upstream 198182 2095555 ~ 2104782 (+)
AMCG00018127 NA coding downstream 23260 2328704 ~ 2334031 (+)
AMCG00018126 crebbpb,LOC108440697,LOC102779454 coding downstream 50833 2356277 ~ 2382087 (+)
AMCG00018129 trap1 coding downstream 79856 2385300 ~ 2391998 (+)
AMCG00018128 NA coding downstream 87861 2393305 ~ 2401409 (+)
AMCG00018131 NA coding downstream 115821 2421265 ~ 2432982 (+)
G114359 NA non-coding upstream 252787 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 281334 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 318814 1983651 ~ 1984150 (+)
G114326 NA non-coding upstream 332555 1969780 ~ 1970409 (+)
G114323 NA non-coding upstream 349700 1952874 ~ 1953264 (+)
G114484 NA non-coding downstream 105033 2410477 ~ 2412789 (+)
G114485 NA non-coding downstream 111363 2416807 ~ 2417796 (+)
G114531 NA non-coding downstream 268193 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 303699 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 363016 2668460 ~ 2668661 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 36189 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 320398 1979046 ~ 1982566 (+)
G114330 NA other upstream 324237 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 329040 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 353371 1947841 ~ 1949593 (+)
G114518 NA other downstream 185869 2491313 ~ 2568938 (+)
G114551 NA other downstream 335402 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1880966 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2289489 4594933 ~ 4604105 (+)
G115049 NA other downstream 2456074 4761518 ~ 4763905 (+)

Expression


Co-expression Network