AMCG00018133


Basic Information

Item Value
gene id AMCG00018133
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2433398 ~ 2433656 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018133
ATGACGATTGTAGCTTTACTGTCCTCTGGCACCACCTGCTGCATCGAGACACAACTGCGGCCTCCCCTGGTACGGCTGCCCCAGGAGCTGGATATCCCAAAACTGCAGCTCCGCAGGCACCACACCCACAAGTGCCAGTGTGACCCCCCAGTCCCGAGCGGCATAGCGATGCCCGGCTCTGagttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018133 True 189 mRNA 0.60 2 2433398 2433656

Neighbor

gene id symbol gene type direction distance location
AMCG00018131 NA coding upstream 416 2421265 ~ 2432982 (+)
AMCG00018128 NA coding upstream 31989 2393305 ~ 2401409 (+)
AMCG00018129 trap1 coding upstream 41400 2385300 ~ 2391998 (+)
AMCG00018126 crebbpb,LOC108440697,LOC102779454 coding upstream 51311 2356277 ~ 2382087 (+)
AMCG00018127 NA coding upstream 99367 2328704 ~ 2334031 (+)
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding downstream 800 2434456 ~ 2443528 (+)
AMCG00018132 NA coding downstream 16133 2449789 ~ 2464758 (+)
AMCG00018138 NA coding downstream 140739 2574395 ~ 2579357 (+)
AMCG00018146 NA coding downstream 265172 2698828 ~ 2717437 (+)
AMCG00018145 NA coding downstream 283846 2717502 ~ 2747393 (+)
G114485 NA non-coding upstream 15602 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 20609 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 383221 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 411768 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 449248 1983651 ~ 1984150 (+)
G114531 NA non-coding downstream 139981 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 175487 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 234804 2668460 ~ 2668661 (+)
G114555 NA non-coding downstream 237251 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 410649 2844305 ~ 2845453 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 166623 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 450832 1979046 ~ 1982566 (+)
G114330 NA other upstream 454671 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 459474 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 483805 1947841 ~ 1949593 (+)
G114518 NA other downstream 57657 2491313 ~ 2568938 (+)
G114551 NA other downstream 207190 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1752754 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2161277 4594933 ~ 4604105 (+)
G115049 NA other downstream 2327862 4761518 ~ 4763905 (+)

Expression


Co-expression Network