AMCG00018148


Basic Information

Item Value
gene id AMCG00018148
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2879568 ~ 2881846 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018148
ATGAAGCCGTTAGAGCCGCATCCACCGAGAATGGCATTGATCTTCATCACTCAGAAGATCAATGCCAGTGCCAGTCAGTGTCAGAGATCAGTGTTTTGTGACACGCAGGGGGCGGAGAGAGCGGTGTCTCAGGTGCGGTACCTGCCGCAGCTCCTGCTCTCCCACACAGAGGACCAGGACACCATGCATCTCGGAGAAGTGGTCGTCTTGATCTCCATCATGTGCGCACTGGAGTCTGCGGCCGAGCTGCCCCCCGGGGTGGACCGCAACACCTATTGTGAGAGTTGCCTGGCTGCAGTGAAGGAGCTGAAGGGTTTCCTGAGGGAGCCATCCACACAACCCAGCGAGGCGAGGGTGAGAACACGGCTGGCTTCCGTGTGTAAAGCGGACACCTTTAATGGCTACAATTTACCCACGGACAACATGGTAGCAGCCTGCAGACATTTGTTAGACACTCATGACAAGGAATTTCTCGAGCTGCTGCTGAGCCGGAGAACGGGCGAATTGGACGTGCTGCTCTGCTACGAACTCTCGCTGGCCTGTGTGGGGGTCAGGAGGCGGCAGCAGGAGAACCGTGAAAAGGCAGAATTCACAGACATGGACAGTTTTCTGCAGGGACAGAAGGAGAAAGTGCGCTTTGTCAACCCTGTTCACAGCAACAGCACCGTTTCTGCCCGGGAGGAGCTGTAGGCCGAGAAGACCGCACCCCTACAGCATGCAGCATCTGAAgcgatttaaataaatgcactggGCACTCTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018148 True 762 mRNA 0.56 5 2879568 2881846

Neighbor

gene id symbol gene type direction distance location
AMCG00018150 NA coding upstream 51798 2814447 ~ 2827770 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding upstream 85695 2788373 ~ 2793873 (+)
AMCG00018144 NA coding upstream 93046 2783062 ~ 2786522 (+)
AMCG00018145 NA coding upstream 132175 2717502 ~ 2747393 (+)
AMCG00018146 NA coding upstream 162131 2698828 ~ 2717437 (+)
AMCG00018155 NA coding downstream 29775 2911621 ~ 2915341 (+)
AMCG00018156 prkar1b,LOC104941536 coding downstream 43569 2925415 ~ 2934755 (+)
AMCG00018163 NA coding downstream 65588 2947434 ~ 2948696 (+)
AMCG00018158 prkar1b,LOC107653458,LOC107661853 coding downstream 68045 2949891 ~ 2965319 (+)
AMCG00018159 NA coding downstream 94889 2976735 ~ 2995555 (+)
G114624 NA non-coding upstream 12331 2864988 ~ 2867237 (+)
G114613 NA non-coding upstream 34115 2844305 ~ 2845453 (+)
G114555 NA non-coding upstream 136882 2670907 ~ 2742686 (+)
G114553 NA non-coding upstream 210907 2668460 ~ 2668661 (+)
G114548 LOC104962440 non-coding upstream 270156 2609143 ~ 2609412 (+)
G114629 NA non-coding downstream 586 2882432 ~ 2882968 (+)
G114674 ubfd1 non-coding downstream 220320 3102166 ~ 3103170 (+)
G114699 NA non-coding downstream 286317 3168163 ~ 3168982 (+)
G114731 NA non-coding downstream 355197 3237043 ~ 3237244 (+)
G114806 NA non-coding downstream 1134232 4016078 ~ 4018982 (+)
G114551 NA other upstream 231794 2640846 ~ 2647774 (+)
G114518 NA other upstream 310630 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 612793 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 897002 1979046 ~ 1982566 (+)
G114330 NA other upstream 900841 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 1304564 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 1713087 4594933 ~ 4604105 (+)
G115049 NA other downstream 1879672 4761518 ~ 4763905 (+)
G115299 NA other downstream 3067617 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 3273642 6155488 ~ 6160616 (+)

Expression


Co-expression Network