Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018155 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 2911621 ~ 2915341 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0001932 | regulation of protein phosphorylation | biological_process |
| GO:0005952 | cAMP-dependent protein kinase complex | cellular_component |
| GO:0008603 | cAMP-dependent protein kinase regulator activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018155 | True | 210 | mRNA | 0.47 | 2 | 2911621 | 2915341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018148 | NA | coding | upstream | 29775 | 2879568 ~ 2881846 (+) |
| AMCG00018150 | NA | coding | upstream | 83851 | 2814447 ~ 2827770 (+) |
| AMCG00018149 | LOC107753764,LOC107661878,LOC107718604 | coding | upstream | 117748 | 2788373 ~ 2793873 (+) |
| AMCG00018144 | NA | coding | upstream | 125099 | 2783062 ~ 2786522 (+) |
| AMCG00018145 | NA | coding | upstream | 164228 | 2717502 ~ 2747393 (+) |
| AMCG00018156 | prkar1b,LOC104941536 | coding | downstream | 10074 | 2925415 ~ 2934755 (+) |
| AMCG00018163 | NA | coding | downstream | 32093 | 2947434 ~ 2948696 (+) |
| AMCG00018158 | prkar1b,LOC107653458,LOC107661853 | coding | downstream | 34550 | 2949891 ~ 2965319 (+) |
| AMCG00018159 | NA | coding | downstream | 61394 | 2976735 ~ 2995555 (+) |
| AMCG00018166 | NA | coding | downstream | 189679 | 3105020 ~ 3122175 (+) |
| G114629 | NA | non-coding | upstream | 28653 | 2882432 ~ 2882968 (+) |
| G114624 | NA | non-coding | upstream | 44384 | 2864988 ~ 2867237 (+) |
| G114613 | NA | non-coding | upstream | 66168 | 2844305 ~ 2845453 (+) |
| G114555 | NA | non-coding | upstream | 168935 | 2670907 ~ 2742686 (+) |
| G114553 | NA | non-coding | upstream | 242960 | 2668460 ~ 2668661 (+) |
| G114674 | ubfd1 | non-coding | downstream | 186825 | 3102166 ~ 3103170 (+) |
| G114699 | NA | non-coding | downstream | 252822 | 3168163 ~ 3168982 (+) |
| G114731 | NA | non-coding | downstream | 321702 | 3237043 ~ 3237244 (+) |
| G114806 | NA | non-coding | downstream | 1100737 | 4016078 ~ 4018982 (+) |
| G114867 | NA | non-coding | downstream | 1278001 | 4193342 ~ 4193996 (+) |
| G114551 | NA | other | upstream | 263847 | 2640846 ~ 2647774 (+) |
| G114518 | NA | other | upstream | 342683 | 2491313 ~ 2568938 (+) |
| AMCG00018119 | tfap4,LOC107661646,LOC107718566,LOC107553667 | other | upstream | 644846 | 2247853 ~ 2266775 (+) |
| AMCG00018106 | NA | other | upstream | 929055 | 1979046 ~ 1982566 (+) |
| G114330 | NA | other | upstream | 932894 | 1977004 ~ 1978727 (+) |
| AMCG00018196 | NA | other | downstream | 1271069 | 4186410 ~ 4193330 (+) |
| AMCG00018216 | telo2 | other | downstream | 1679592 | 4594933 ~ 4604105 (+) |
| G115049 | NA | other | downstream | 1846177 | 4761518 ~ 4763905 (+) |
| G115299 | NA | other | downstream | 3034122 | 5949463 ~ 5951017 (+) |
| AMCG00018272 | NA | other | downstream | 3240147 | 6155488 ~ 6160616 (+) |
