AMCG00018184 (baiap3,LOC107550313,LOC107719179,LOC107703313)


Basic Information

Item Value
gene id AMCG00018184
gene name baiap3,LOC107550313,LOC107719179,LOC107703313
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 3980692 ~ 4013068 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018184
ATGAGCATGTCGACGCTGTTGGAGATAAAGAGCAGCGTGCTGAGGCAGGTGCAGAGCCGTCAGTCCCTGCGCGGCAGAAAGGAGACTCCGGCCCCGGCATCCAACCCCGACACACTCAGCACCGAAGCTGCTGCTACCGGGGCGTCCCTTTTAAAGCCCTGCCGGAGCTCAGAGAAGCGTGGGAGGGTGCTGTTCCCTAGCAACCCTCAGGCGGAGCGGTTATGTGAGACGTATGGAAGCAGGGACGCCTGGGTTGTCGAAGGAGATGGTGAGTTCTTCGAGCGCATGAAAAGCATCCTTCAGAAGCAGGGAAACATGCAGCGTTCGGCGCGCAGTGAGCTGGACCTCCTTTACGAAGAGGCCCTGTACACCGTGGTCAACAGGGTTGGCGTCCCCTCCCCACAGTACGTGATGGATGAGACCGAGCTCTTCGCTTATCTGCAGAAgCGTGCTTTCAACGTCACCCGGACGCTCGGCTTTCTCGTGGCCTTTAAAAACAGGCCCCTGTCAAAGCTGGCGCTGTTGTCCGGGTCAGACCCTGCGAAGGGCCCTGCCTGTCAGTGCTTGGGGTGCATATCATCATTTCCTCCGATTACCTGGCCTTTGCTGCCAGTGACGCAGGTGACATCCCGAGCCGTGTTTGATGTGGCTGCTGAATCCAATGTGCTGCCCTGGGTCCGCAACAAGGGCCCCGAGCTGACAGAAGAACACGACATAATCCTCCAAAGGGTTCGAGGATCTAAGCGGGCGAGTTACTCTCTGAAAGTCTCGGTGATGAAAGGCAAGAACCTTCTGGCTAAAGATGCCAACGGCTACAGTGACCCGTACTGCATGCTGGGCATCCTGCTGGGCCAGAGCCCCAGGGAGAcggaggagaagaaagagaggaagTTTAGCTTCCGAAAGAAGAAAGACAAGGCCGAGAAACGGTCCAGCGTCAGGGAGGTGCTCCCCGCCAAGTACATCCAGGTCACCGAGGTCAAATCCCAGACTCTCAATCCCGTTTGGAatgagcattttgttttTGAGATTGACGACGTCTACAGCGACCTGCTCCACCTGGACATATGGGACCACGATGACGATGTCTCGGTGGCAGAGGCCTGCAAGAAGCTCAACGAAGTCAGCGGCTTCAAGGGCATGGGCAGGTATTTCAAGCAGATTGCCAAATCTGTCCGAACGAATGGGACGGCAGCTTCGGTGGAAGAGAACGTGGATGACTTTCTGGGCTGCCTCAATATACCCATTAACGAGATCCCTGCGAATGGTTTCGATAAGTGGTTCAAACTGGAGCCCCGATCCAGTGCGTCCAAAGTCCAGGGAGAGTGCCACCTCATCCTCAGGCTGGTCACAACCCAGAGAGACACAACCCTGGGGAAGAAGGACTCCTACGCATCCATTCACGAGAGGCTGCTGAGTCGGGTCCTGCAGTACGAGCATGCGCAAGTGAAGACCGAGCCCTACAACTGGGAGGGAAAGCTGAGCCAGCCGGCATGGACGCTGATTTCCCATCATGCCGTGCAGACTGACCTGTCCGCGCAGCAGAAGGCCATCATACGGTGGCAGTGCTACAGCCAGCACCACCGGGCGCACACCATGGCCTACACCTTCCTGCTGGAACTGCTGCGCAACGTGGAGCAGGAGTGGGACGACTCGACCCTGCAGCCGGAGATGGAGCAGGGCCTGGCAGACAGTTTCGGCCTCTTCGTGGAGTATTGCCTGGCGCTGCTGAAGAACATGCGCCAAGTGTTCCCCTGCTCCAGCGCCGCTGCCGTCGCTCGCTGCGAGTTCATGCTGAGGTGTCTGGGACAGATCCATGCCATGCAGACCTTCAAAAAGGTGTGTCCGTTCCACAACGAGCTCCATGTGGAGATCGTCACCGTTATCAAGAAGAGCACGCTGGAGTGGTACGAGGGGACGATCTCCACCTTCAAGCCGGAGGAGGGGACCCTGGAGGAGCAAATGAAGCGCCTGGTGCTGGTGGTGGACGCAGTCAGCGCTGACGTGCAGAAGAGCCAGAATGTGTACAATAAACTGTTCAGCAGTGCCGTTAAGATAGATTTCTTCAGCATCTCCTATCGGCAGCTGGAGAAACTGGTCGCCGATGACGTGTGCGCTGCCACAGAGAAGGTGTGCGGCTCCCTGGAGCAGGAGGGCTCCCGCCTCACGCAGGGCATGGGGGAGACGCTGTTCGAGCTCTACATGTCCCTGAAGACCCTGAAGCAGTACAGAGAGTTCCTCCCGCTGAAGGACACCAAGGCACTGGCCCTGTCTGGCTTTCACGACTGGTTCAAGAGCTCTATCCACAAGTGGCTGCAGATCGTCCATGAGAGGTCCTGCGACCGGATCCGCAAAGCGGTGGAGGTGGACAAGCTGGAACCTGTTCACCCTTTATCGAAGCACAGCACCTCGGCGGTGGACGTGACCACCTGTTTCAATCAAGTCAGGGAATTCTGGGTCCAGCTGGCCTGGCCGGATTCTGCGGGGGCTTTTATCTTCGTCACTCGGCTGACAGACGATGTGTGCAGCGCGGCCGTTTGTTACTCCGAGCTGATCAAGCGCAAAATAGAGAGGAGCCAACAGCGACCGGACAGCAAGAACCTCACCAACCAGCTCTGCATCGCCCTCAACAACATCGAACACGTGCGCAAGTTCATCAGCAACCTGCCCAAGGACCTGGACTGGAAGGCCCTGGAGCAGGCAATGGAGGAGTCCTGTGGGGCTGACGGAAAGGAGCAGGTCCAGAAAGCCCTCAATGCCCAGCTCCTCAACATCGACATGGACCTGCAGCGCGAAGCCAAGCGCATGATCGCCAACCTCACGGACAAGATGGTGCTGGACTTGAAGAAGTACATCCAGCATATCAGTCTGTCCCCGGACTCCATCAACAACGATGACGAAGACAAAAGCAACCAGGCAGAGCGGCACAGCGTGGAGAGCAGACTCACCGGCTCCTGTTGGGAGGCAGGCTGGCAGCGCGCTTGCTTCAGCCCCGTGGCAGCTGCTTCACGGCAACGTCTCCTCACCGCTTTTTCAGAAATGAACTGTAGACGTTCAAGTGTGGCAAGAGGCAAGGGAGAGGCCGTGACTCCTCTGATGAAGTACCTGGATGACACTTTGGTGATCCTGAATGAGTCGTTGGTGAAGGAGAATCTGGACAgGGTGCTGCATGGCCTGTGGCGCCTCCTCCTCAGGCTGATCTTCGACACAGTGGCCGAGAACCGAGGCGTGTCGGTCGAGTTTTACGGGCGGTTCCACTACACTGTGGAGGCTCTGGTGGAGTTCTTCCATGCCGAGGGAGAGGGTCTCACGCTTGAAGACCTCAGGAACGAAGACTACAAGGcgctggaggaggagctgagGCTGAACAAGTGCTCGTCCAATGAGCTGATAGAGCAGTACTTCCTGGAGAAGATCTGTCAGCAGAGAACTCTGAAGCACAGTAAATTCGGCAGGATCAGCGTGAAATGTTACTACGAGGCGGCCGACCAGAGGCTCACAGTGGAGGTCCTGCACGCGGCCGACCTCATCGCTCTGGACGCCAACGGTCTCAGTGACCCCTTTGTCATCGTGGAGCTGTGCCCACACCACCTGTTCCCCACGACCAAGAGTCAGCGCACTCAAGTGAAGAATAAAACCCTTCACCCCGTGTTCGACGAGCTCTTCCAGTTCCACGTCTCTCCGGAGCAGTACAGGAAGAAGTTCGCCTGCATCGAGTTCACGGTCATGGACCACGACTGGCTGTCCACCAATGACTTCGCCGGGGAGGCCACCGCGCCCCTCAGCGACTTCTGCGGCCCGGACAAGGCCGTCCTGCCCGGGGGAGGGAAGGCCGTGCAGCCTCTGATACTGCAGCTGTCCAGACCCAAGCCCAGCGACAAGCCTATCTTGAAGATGCTGGAGGCGAGAGCCGGGGACAGGGAGGCCCAGGAGTTCGTGAAGAAGCTGAAAGAGATCGAGAAGTCGATGGCCGAAGAGGACTGAGCGGCGGCGTGACCGGACCCCCCGGCCCCCGGGTCTCTCCAGCCACTTCACCACAGTGTTCCGAGAAAAAGTCCTGttgtacatttagtttttattgagCGAAGAACCCTGTCTGTCTGGTTCCGTCTGCAGGTGACCTTGCGTTGTGGTCGTGCGTTGTGTTCCCCTACAGCCCAGGGGTCTGCAAACCCCATCCTACGAGCCAGGCTTCTGGCTTTCTTTCCTGCTCAGTAATTAATCGCTTAATTACTACAAATCTCACACTagaaactgcactgcacacttGTTTACACTCATTGGAAATCGTTAGACAGACATCCAGGCACAGACATTGCATGTgcgtaacatttttttttctggagtgAGCGGTCTTCTTTACTGGCATTTTACTGTACTCTCTACTGATCCTCTTTCAATGTTTTCTGAATTAGTACAAGTTAGCACCTTTTCCAGGTTTCAACGTGGACCTCTGGAAGTGAGGCGTGGGAGTGCGTCTCCGCAGGACCCCCGTGCTGACCCCTGGCCTGGCCGTTTTCCTTTGCTAATCCCCGAGCCAGTCTTCGCGCAGCTTCACGTTTTAACATTTGCTCTATAAACGCCAGGCgagcaggaggagagagacgACCTTGCAGATCAATTATGTGATGAGAACtatgaatgtattataaaagacatggcttttttttttcctgtaaataagtgtcatttaaagaaaagagaaaagtaaGTATAACATTTGGTGACCTGTAAAGACAATCTGCTTCAAAGGTGGTTTTCTTGTGCAAAGTGTAATGGAGTTTCTATTATATAATGTCGTCTTCTTGGAATCTATAAATGTGACGGATCcttttaagaagaagaagaatttctGTATTAGTCTGAAGTAAACTCCGTGCCCGTTG

Function

symbol description
baiap3 Predicted to act upstream of or within exocytosis. Orthologous to human BAIAP3 (BAI1 associated protein 3).

NR:

description
PREDICTED: BAI1-associated protein 3-like

GO: NA

KEGG:

id description
K15621 BAIAP3; BAI1-associated protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018184 True 4886 mRNA 0.56 35 3980692 4013068

Neighbor

gene id symbol gene type direction distance location
AMCG00018180 ube2i,LOC107677193 coding upstream 23953 3949741 ~ 3956739 (+)
AMCG00018178 NA coding upstream 37172 3930521 ~ 3943520 (+)
AMCG00018179 pdpk1,LOC100380750 coding upstream 70504 3900513 ~ 3910188 (+)
AMCG00018175 NA coding upstream 102867 3868385 ~ 3877825 (+)
AMCG00018174 NA coding upstream 131546 3832577 ~ 3849146 (+)
AMCG00018181 LOC106940169,LOC103155118,LOC106907654,LOC103462289 coding downstream 7648 4020716 ~ 4027794 (+)
AMCG00018183 LOC107377396,LOC105355442,LOC107556640,LOC106912265,LOC107572204,LOC101073377,LOC107681642 coding downstream 47743 4060811 ~ 4063955 (+)
AMCG00018182 NA coding downstream 56040 4069108 ~ 4076796 (+)
AMCG00018191 NA coding downstream 126380 4139448 ~ 4154435 (+)
AMCG00018190 NA coding downstream 147323 4160391 ~ 4162600 (+)
G114731 NA non-coding upstream 743448 3237043 ~ 3237244 (+)
G114699 NA non-coding upstream 811710 3168163 ~ 3168982 (+)
G114674 ubfd1 non-coding upstream 877522 3102166 ~ 3103170 (+)
G114629 NA non-coding upstream 1097724 2882432 ~ 2882968 (+)
G114624 NA non-coding upstream 1113455 2864988 ~ 2867237 (+)
G114806 NA non-coding downstream 3010 4016078 ~ 4018982 (+)
G114867 NA non-coding downstream 180274 4193342 ~ 4193996 (+)
G114868 NA non-coding downstream 181209 4194277 ~ 4198050 (+)
G114888 NA non-coding downstream 285570 4298638 ~ 4301678 (+)
G114940 NA non-coding downstream 373112 4386180 ~ 4386889 (+)
G114551 NA other upstream 1332918 2640846 ~ 2647774 (+)
G114518 NA other upstream 1411754 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 1713917 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 1998126 1979046 ~ 1982566 (+)
G114330 NA other upstream 2001965 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 173342 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 581865 4594933 ~ 4604105 (+)
G115049 NA other downstream 748450 4761518 ~ 4763905 (+)
G115299 NA other downstream 1936395 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 2142420 6155488 ~ 6160616 (+)

Expression


Co-expression Network