AMCG00018190


Basic Information

Item Value
gene id AMCG00018190
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4160391 ~ 4162600 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018190
ATGGTGGAGACTGTGCTCCCCAGACTTTGTCCTGTCGCTCCTCTCAAGAGAGCCCCAGTTGGCGGCGTTCGCTCCCCCGAGGAGGCAGTTCTGGGCCTCACAATACCGAGGGAAGGAGGCCGGACAGAGAGCAGTGATTCAGCGGGGCTGGCAGCTCGCACTGAAGAGGGAGACAAGGGGCTGAATAAAGCGCTGGGACGGCACTGTGTTTTAACGGCCGCGGAGGCTCTTGGCTGCGGTACAGAGGCATTTCAGCTGCATTCCTCGGGGGAGGACTTTAATATCATTTCGGTTCTCATGACAAAGAATTCCAAGGCCACAAAGGATATGCTGTGTAAGCCTCCCCGCCCGCGCCTGCAAACACAGCGGCCCCCCAGCGCACCAATCACTTTCCGAGCAAGGAAAGGTCGGTGTCTGCAGATTTGCACAGCTGCTCGCATTAACCCTTcggtcactgtgctgtttgttcACAGCTGGTCTGAGGACCGCGCGGCCTGGAAGTTCCAGAAGACGAGGCAGACGTGGCTCCTGCAGCACATGTACGACCGAGAGAAGGTCCCGGACGAAAGCTTTGCCGTGCTGCTGGAGTACCTGGAGGGGCTGCAGGGTGCGGCGAGGGACGCCACCGTGGAGCAGGCCGAGAAGCTCGTGAGGGAGCAGGACGGGGCGGCCGACGCGTCTCGGAGGGGCAGGGAGGTCGTACAGCTGCTGTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018190 True 717 mRNA 0.61 3 4160391 4162600

Neighbor

gene id symbol gene type direction distance location
AMCG00018191 NA coding upstream 5956 4139448 ~ 4154435 (+)
AMCG00018182 NA coding upstream 83595 4069108 ~ 4076796 (+)
AMCG00018183 LOC107377396,LOC105355442,LOC107556640,LOC106912265,LOC107572204,LOC101073377,LOC107681642 coding upstream 96436 4060811 ~ 4063955 (+)
AMCG00018181 LOC106940169,LOC103155118,LOC106907654,LOC103462289 coding upstream 132597 4020716 ~ 4027794 (+)
AMCG00018184 baiap3,LOC107550313,LOC107719179,LOC107703313 coding upstream 147323 3980692 ~ 4013068 (+)
AMCG00018189 NA coding downstream 6635 4169235 ~ 4171925 (+)
AMCG00018197 NA coding downstream 46533 4209133 ~ 4211747 (+)
AMCG00018203 LOC106579217,LOC108264572,LOC106578255 coding downstream 133008 4295608 ~ 4296231 (+)
AMCG00018204 LOC104948217 coding downstream 180334 4342934 ~ 4347960 (+)
AMCG00018211 xpo6,LOC106600647 coding downstream 331843 4494443 ~ 4515088 (+)
G114806 NA non-coding upstream 141409 4016078 ~ 4018982 (+)
G114731 NA non-coding upstream 923147 3237043 ~ 3237244 (+)
G114699 NA non-coding upstream 991409 3168163 ~ 3168982 (+)
G114674 ubfd1 non-coding upstream 1057221 3102166 ~ 3103170 (+)
G114629 NA non-coding upstream 1277423 2882432 ~ 2882968 (+)
G114867 NA non-coding downstream 30742 4193342 ~ 4193996 (+)
G114868 NA non-coding downstream 31677 4194277 ~ 4198050 (+)
G114888 NA non-coding downstream 136038 4298638 ~ 4301678 (+)
G114940 NA non-coding downstream 223580 4386180 ~ 4386889 (+)
G114984 NA non-coding downstream 426695 4589295 ~ 4590074 (+)
G114551 NA other upstream 1512617 2640846 ~ 2647774 (+)
G114518 NA other upstream 1591453 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 1893616 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 2177825 1979046 ~ 1982566 (+)
G114330 NA other upstream 2181664 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 23810 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 432333 4594933 ~ 4604105 (+)
G115049 NA other downstream 598918 4761518 ~ 4763905 (+)
G115299 NA other downstream 1786863 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1992888 6155488 ~ 6160616 (+)

Expression


Co-expression Network