AMCG00018191


Basic Information

Item Value
gene id AMCG00018191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4139448 ~ 4154435 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018191
CAGATGTTGATGTGCCCGGAGATCCAGGAGAGCAGGTTTCACTTCGGTGACGATGCAAACCTGGCCAGAACAAAACCCTGTCAGGGGGCCTTCAATTCAGAGATGTCTCAAACTCATGGCAAAGTCTTGCAGCTCTGGAAGGATGTGGGCCTGACTGATGTAGCCCTTCAGAATCTCATCACGGCAGACCCTCTTACCTGGACCTGCCTGTTCTCAGTGGCACCGCTCCGCCGCCAGCTGGTGTCTGAAGGGGAGTGCGTCGGCGGTGCCGGTGGAAGTGAGATCGGGGAAGCGGTCAAGGGCCGTGCTTTGGCCTGGGGCGgattgggggcgggggggttgttATCTCTAGAATTCTTCACCGTGACTCTAGAACTCTCCCCCACAGCTCCAGAACTGAGTACTGGTCATCTGACCAGCCAACCACTGTCAAGGAGTGAGAAAGCTGAACCAGAGGTGAGAGTGACAGaagatgaggaggaagaggagaaggagctggaggaggaggaggagttaAGCCCAGAGGAGATGAGAgttctggaaagaaaaatgaagaaggagagaaagaaggaggagaagaggaagcTGAAAGAGTCCGGGATGAGTGTGAAGAAGACCGAGCCTGCCAAGCCCACCGCGGCCCAGCTCGCCCTGGACTATCTCAACTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018191 True 672 mRNA 0.56 6 4139448 4154435

Neighbor

gene id symbol gene type direction distance location
AMCG00018182 NA coding upstream 62652 4069108 ~ 4076796 (+)
AMCG00018183 LOC107377396,LOC105355442,LOC107556640,LOC106912265,LOC107572204,LOC101073377,LOC107681642 coding upstream 75493 4060811 ~ 4063955 (+)
AMCG00018181 LOC106940169,LOC103155118,LOC106907654,LOC103462289 coding upstream 111654 4020716 ~ 4027794 (+)
AMCG00018184 baiap3,LOC107550313,LOC107719179,LOC107703313 coding upstream 126380 3980692 ~ 4013068 (+)
AMCG00018180 ube2i,LOC107677193 coding upstream 182709 3949741 ~ 3956739 (+)
AMCG00018190 NA coding downstream 5956 4160391 ~ 4162600 (+)
AMCG00018189 NA coding downstream 14800 4169235 ~ 4171925 (+)
AMCG00018197 NA coding downstream 54698 4209133 ~ 4211747 (+)
AMCG00018203 LOC106579217,LOC108264572,LOC106578255 coding downstream 141173 4295608 ~ 4296231 (+)
AMCG00018204 LOC104948217 coding downstream 188499 4342934 ~ 4347960 (+)
G114806 NA non-coding upstream 120466 4016078 ~ 4018982 (+)
G114731 NA non-coding upstream 902204 3237043 ~ 3237244 (+)
G114699 NA non-coding upstream 970466 3168163 ~ 3168982 (+)
G114674 ubfd1 non-coding upstream 1036278 3102166 ~ 3103170 (+)
G114629 NA non-coding upstream 1256480 2882432 ~ 2882968 (+)
G114867 NA non-coding downstream 38907 4193342 ~ 4193996 (+)
G114868 NA non-coding downstream 39842 4194277 ~ 4198050 (+)
G114888 NA non-coding downstream 144203 4298638 ~ 4301678 (+)
G114940 NA non-coding downstream 231745 4386180 ~ 4386889 (+)
G114984 NA non-coding downstream 434860 4589295 ~ 4590074 (+)
G114551 NA other upstream 1491674 2640846 ~ 2647774 (+)
G114518 NA other upstream 1570510 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 1872673 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 2156882 1979046 ~ 1982566 (+)
G114330 NA other upstream 2160721 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 31975 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 440498 4594933 ~ 4604105 (+)
G115049 NA other downstream 607083 4761518 ~ 4763905 (+)
G115299 NA other downstream 1795028 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 2001053 6155488 ~ 6160616 (+)

Expression


Co-expression Network