AMCG00018195



Basic Information


Item Value
gene id AMCG00018195
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4172105 ~ 4185911 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00018195
GCCCAACTGTAAGAGCTCGAGACGGCGGCCAAAAAAGtccgttttgtttttaaagtttcgCCTTTTTATGTGCAATTGGACGTTATACACATCCGCAAGTCTGGGTGAGAATGAGCTCGGACTGCCGCTCCATGCTCGCCCGTGTGCCGGCCTGCATCCCGGCCCTGGACTCGGACGCCTCCTGCGGCACATCCGACGGTGAGGAGGAGCTGTTGGTCTCTAACCGAGACCCAGCTCCCCTGCTCCCAGGATCGTCAGAGGAGTCCCACTACTTATTCTTCGAGGACCCAGAGCTCGAgGAACAACTTAGAGGGAGGAAACCAAGGCAGTGTTGGACTGAGGGGAAATCCAGTGATCGGAGCATTTCGGATGACCTTGCCTTCCCCCTGTCATGCGTCTCTGCTGATGCAGCCAGAGGAGAGAGAACCTCATCTGCCAATGGAGACGGTCCTGAGGAGGATTTAGATGCCGAGGCTCATGGGAGAACAGTCGGCCTCAGGGAGCTGCTGCGTTCCCAATCCCAGGAGGAGCTGCGAGAAAAGCCTGAGAAAGTCCAATCAAACGGGCTTTCTCTGCAGCTGCTGGAGCAGTGGGACCTGGATGAAGCTCTGCAGACCCTGATGCACAGGGGGGACACGGCCACTGCTGAGGACCCGGCGCCTATAGCCGCACACACTGACCGGGCCAGGGGGAGGGCTGAGGCCGGTCTGATGGAGAGGTTGACTGCCCTGTGTGTGAAGCAGGCCATAGAGAGAGTGGAAGATAAGGAAGACACCCTGCCTGCTGCTCCAGACTCGGGGCTCAATACTGTCTCTTCACTTCATGCCCAAGATCTCAGGAATGGACGCTGGCTCCTTAAGGGAGTGGAATCAGAGCTACCAAGGGACCGAAGAGCCGAAGCTCCTACAGTCCACATCGACCTGCGCGACCCTGAGCCCCCCAGACACCCCCCCACGGCAGAAACACTGGAGCAGAGCACCGGACCCACAGAACCCAGAAACCACAGTGAACTGACTGGGAAGAGCTTGTTGCTCCAAAAGCTGCGAGAAGCGAACCGGGGGGACACAGGGACAGCCGGTGCTGTGAAGCGACACCGGACCGGATCAGCCAAGAGGAGGAAGAAACTTCGCAGCCCAACCCCGAGCGGGATTGGTGGAGAGACACAGCTTGCAGGGCCGGGCGTGAAACCCCCCGCACCTGAGACGCAGAGCCAGCCGGACAGGCCCCAGGAAGGAGGGACAGGCCCCGGGGAGAGCGTCCACCCGGAGCAGACCACCACCGTCGGCAAGAAGGACGAAGAGATCCTCGCAAACCGGAGGGCCGAGGCGTCTCGGGATCCAGAGCGCagggagcagcagcagaaggaGGCGGCCCGGCGACAGCAGCTCCACGAGCACCTGGAGGCCTTCAAACCCCAGCGCTTGGCCCCGGGCAGGCAGCCCACCGCCCCGGCCACTTCTGTGCTGTACGACGTGGAGGCCTCCTATCTCCCGTCAGTTAGCCCTCTGTGTCCAGAGAGTGCAAACAGAGAGACTGTCCTGCTGACCGTGCGTCTGTCCAGTCCTGGCCAGGTGACCGCAGGTACTCAGGCCAACGGACCGACCCTCAGCTCGGCAGTAACGGGGGCTACTGTGTATAACTGCCTGGTGGCCTGGTTTCTGTCCTTGGTGGGTCCGGACCCCCACAGCTGCGAGGAGAGTGCCGGCGCAGACGGACGGCCACCGTTCTGGGTGGCGGGGCTGCAGCAGCTGTGCGGGGGGGGCGGCCTGGCGCTGTATGTGTGCGCCACTTCGTACGAGGAGGGGCCCCCGCGCACCAGGAGACACAGACGGCAAGAGGAGCGGAGCAGCGCCCTGTTCCCCCAGCGTGTGGGCCGGTTCCTGTCCCAGACGGCTCTGAGCGCCGTCGTCCACTGGGCACCACAGCTCAGCTGGTTGCTGAGCAGGCAGGCCCATCCCCCGCACTTCAGGCCGCCCGCCACCCGCCTCGACAGCTTTGTCTCCGTCAACCCCGAGAAGGAGGCGCTGGAGAAGGTCTTCGGAGCGAGACTTGGATTCTACTGGCGGACACTGGAGACGGAGGACCAGGCCTGTGAGAGCGCAGGGGACCCCACAAGCACGCCCCACACCAACCCCGAGGTGGCGATGGCTCTGGCCTACCGGATGCTGTGGCAGGACCCCCTGGTGACTCACCACACCCTCCAGCTGCTCCTCGACGCCAGCCTGGACGTGTGTGGACTGCGCCTGCTCTTCCCACCACCCGGTCTGCTGAGCGCCAGCACAGGCCCTTTGGACCCAGAGCTGGCCAGGGTGACCGACCCCAACTCCATCAACGCCCTGCACTGCCACAGCCGAGACCTGCCCCTGTTCTACTCCCCCCGCCCGGCCGTCCGCATCCAGCGGGAGCTCTGCGTCTGGTTTGGGGGGAGGGCCCCCAAGGAGGGAGTGGTTCCTGTTGGCCCACAGAGCTGCGGTCCCGCACCCACGGACAGGTCTGTCCCCGTGGCGCCATCCCTGTCCCTCAGAGAGGACAGTAAGCGTGGCGACCAAGGCCCCAGCCCCCGGGACTCGGCCTGCCTCCCCGCGGCTCTCAGTGCGACAGTCGCAGCGGATATCTTCCTGCTGGTGTCCCCGGCCGTGCCCCCCTGTTGCTTTGGAGATGTGCTGTCGGTGTGCTGTAAGCGAGGCTTCAGCCTTCGGGGTCTCCAGCGGCTGCAGCTCTCCCCCAGACGAGCCCAGGGCCTGGGTCTGACGAGCCGGCAGATCCCCGTCTACTGCTCTCCGCCCCCTCCGTATGGCCTCTCAGCGGAGGACGAGCCACCCGTCGCGCTGCCCTCGCACTGCCTGGCGGTCCTGCTGCGGAGGGAGAACGCCCTGCACCACTGTGCCGGCCTGCTGACAGGTCTCATGAGCGAGTTTGCAGAGCAGGGTCTGACGGGCCCAGTGAACCGCAGGCTGCCCCTCAACGTCCGGCTGGAGACCGGCAGCTGCTTCCACGCACTGCCCTACAGCGACCGCCTCCTGCACAGCCTGGGCAGGTCCATGTGGTTGGTGCCGGACTGCGACAGCGTCTACCACAGCCTGCGGTCCACTCGTAGCTTTCCCTCCAACCCGGAAGTGGAGCAGGTGGTGGTCCTGACTCTGACCGGGGCCGACATCGAGGGACCTGGAGCAGCTGTCCTGCGCAGGGTGCTGAGAGGGGAGGCCGCCCAGCTCGGAGGCACAGCGGGTGCCGTGAAAGAAGGGTTCGAGCTGCTGGCGCTGAAGTGGCTCCCCGTGTTGTCGGACCCCCAGGCCTGTGAGGTCAGCCCCTTCGAGGTGGGGGACCAGCAGTGGCGGGGCAGCTTGGCGGCCCTGGCGTCCGCGCCCGCCCTGGTCTGCGCTCTGCGGAGGGTCGACGCCTTCGCCTTCCTGTACCGCCTCCTGCAGGACTGCGGCGCTGGCCTGGCAGTGATGTCGCCCACACCGCAGCTGGCCTTCCGGCAGGCGGCCCACTTCTTCTCCAGCAGGGAGTTGATACCAGATCACAGCGCCCGTCCCTTGCTACGGTTCCTCCCGCCTCCCAGCAGGAGCAGCCGCCCCCCCGCGAAGCAGCCGTGTCCTGACCCGGCACAGTCCGTCTTCAGTTGCATGGTAgaaaGCCCCGAGCCCCTTGTGACGGTGGTGCTGTTCAAGCCTGGCGTGTGGCGCAGCTCCCCAGGGAAGATCCTCAGCAGCGTCCAGCAGGCCGGCTTCTGCATCGTAGGTCTGGCCCTGCTGGTCCTGGGGCCGCAGGCGGCGGCAGCACTGGTGTCCGGAGCCGAGCGCCAGCAGGAGCCTGGAGCCGTGGCCGCCCATGTGCAGTACCTGACGTCCGGCCCCTCGCTGGCTCTGTGTCTCCAGAGAGAGAACGCAGTGAAGAGGCTGCTGGACCTGCTGGGGCCTGAGGACCCCCTTGTGGCCCGGGCCCAGGACCCGTGTCTGTGGAGAGCTCACTACGGCACCGACCTGCTGCACAACGGCGTCTACGGGTCCCGGTCCTACCGGAGCGCCGTGCGGGACGCCAGGATGCTGTTTCCAGAGGGTCTGTGCTGCAGAGAAACCGCACTGATGGCACGAGAGCAGATACCCTGTATGACCTCTGACCACAGCGCCAGCATGCAGCCAATGAACAGCCACCGGCTCGCCCACAGGACCACAGTCCCCAGCCCCCGCACACCGCTCGCACGGCCCTCAGGGTGCAGTGCTCTCCGTCAGACCGCCTGTCTGCTGGTCCCCTCCCGGCTCCTGCAGGCATGCCCCCCCGCCCCGTGGGCCGAGCTGCTGGATCAGCTGGCACAGAGAGCCTGCCGCCTGGTGGGGGGGCGACTGTGCGCCCTGGACAGACAGCAGCGTCAGCGCGTCGGGGAGGCGCTGCAGCCGTCCTGGGAGAGCGGCGCAGTGGTGAGTGGCGTCTCTGAAGCTCGCCGTGATCACGCAGTCGGACCACAGTTACAAAAACAGCATCTCGTATGCCGCTGGGGGCCGGGGAGCGGTACTGCTGACCCTCCGTGTCCCCCGCAGAGCGCCGCGCTGTCTGAAGGGCCCTGTCTCATCCTGGCGCTGGAGGGAGACAACACGGTCACCTGCTTCGCTTCAGTGCTGGACAGtgtctgctgggagCGGCCCGAGCTGCAGGAGGCGAGGCAGAGCCTGCTGTTCCCCCACAGCGAGAGACAGGCAACCAGCCAGCACGGCATCgagccactgcccccccgccTGGGCTCCAGGGCCGCGGAGGCTTCCAGAAGCCAAGGACACGAGCCATACCCTGGACAGCCGCCCACTTCTGTTCTCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00018195 True 4817 mRNA 0.66 30 4172105 4185911
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00018192 gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765 coding downstream 46807 4124297 ~ 4125298 (-)
AMCG00018194 NA coding downstream 59275 4111673 ~ 4112830 (-)
AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding downstream 76039 4094987 ~ 4096066 (-)
AMCG00018185 NA coding downstream 104788 4065860 ~ 4067317 (-)
AMCG00018186 NA coding downstream 114632 4033690 ~ 4057473 (-)
AMCG00018202 NA coding upstream 6567 4192478 ~ 4196034 (-)
AMCG00018201 NA coding upstream 10124 4196035 ~ 4197864 (-)
AMCG00018200 wdr24,LOC106578258 coding upstream 13991 4199902 ~ 4209121 (-)
AMCG00018198 rhbdl1 coding upstream 33910 4219821 ~ 4225283 (-)
AMCG00018199 rhbdl1,LOC102790881,LOC107677126 coding upstream 56367 4242278 ~ 4260750 (-)
G114785 NA non-coding downstream 261706 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 770167 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 1030795 3140095 ~ 3141310 (-)
G114681 NA non-coding downstream 1094345 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 1173847 2996035 ~ 2998258 (-)
G114915 NA non-coding upstream 109400 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 200022 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 403384 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 493629 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 635054 4820965 ~ 4821411 (-)
G114838 NA other downstream 85074 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 1524294 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1562626 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 1883243 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 2104521 2006906 ~ 2067584 (-)
G115020 NA other upstream 400151 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 460236 4646147 ~ 4651641 (-)
G115174 NA other upstream 1100475 5286386 ~ 5287873 (-)
G115183 NA other upstream 1114196 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 1170935 5356846 ~ 5366754 (-)

Expression


AMCG00018195 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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AMCG00018195 Expression in each Bioproject

Bar chart with 7 bars.
AMCG00018195 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
End of interactive chart.

Co-expression Network