Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018197 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 4209133 ~ 4211747 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044428 | obsolete nuclear part | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018197 | True | 483 | mRNA | 0.66 | 4 | 4209133 | 4211747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018189 | NA | coding | upstream | 37208 | 4169235 ~ 4171925 (+) |
| AMCG00018190 | NA | coding | upstream | 46533 | 4160391 ~ 4162600 (+) |
| AMCG00018191 | NA | coding | upstream | 54698 | 4139448 ~ 4154435 (+) |
| AMCG00018182 | NA | coding | upstream | 132337 | 4069108 ~ 4076796 (+) |
| AMCG00018183 | LOC107377396,LOC105355442,LOC107556640,LOC106912265,LOC107572204,LOC101073377,LOC107681642 | coding | upstream | 145178 | 4060811 ~ 4063955 (+) |
| AMCG00018203 | LOC106579217,LOC108264572,LOC106578255 | coding | downstream | 83861 | 4295608 ~ 4296231 (+) |
| AMCG00018204 | LOC104948217 | coding | downstream | 131187 | 4342934 ~ 4347960 (+) |
| AMCG00018211 | xpo6,LOC106600647 | coding | downstream | 282696 | 4494443 ~ 4515088 (+) |
| AMCG00018214 | NA | coding | downstream | 306716 | 4518463 ~ 4524338 (+) |
| AMCG00018213 | decr2,LOC107677236,LOC107667207 | coding | downstream | 314253 | 4526000 ~ 4529339 (+) |
| G114868 | NA | non-coding | upstream | 11083 | 4194277 ~ 4198050 (+) |
| G114867 | NA | non-coding | upstream | 15137 | 4193342 ~ 4193996 (+) |
| G114806 | NA | non-coding | upstream | 190151 | 4016078 ~ 4018982 (+) |
| G114731 | NA | non-coding | upstream | 971889 | 3237043 ~ 3237244 (+) |
| G114699 | NA | non-coding | upstream | 1040151 | 3168163 ~ 3168982 (+) |
| G114888 | NA | non-coding | downstream | 86891 | 4298638 ~ 4301678 (+) |
| G114940 | NA | non-coding | downstream | 174433 | 4386180 ~ 4386889 (+) |
| G114984 | NA | non-coding | downstream | 377548 | 4589295 ~ 4590074 (+) |
| G114985 | NA | non-coding | downstream | 381713 | 4593460 ~ 4593845 (+) |
| G115061 | NA | non-coding | downstream | 602271 | 4814018 ~ 4814419 (+) |
| AMCG00018196 | NA | other | upstream | 15803 | 4186410 ~ 4193330 (+) |
| G114551 | NA | other | upstream | 1561359 | 2640846 ~ 2647774 (+) |
| G114518 | NA | other | upstream | 1640195 | 2491313 ~ 2568938 (+) |
| AMCG00018119 | tfap4,LOC107661646,LOC107718566,LOC107553667 | other | upstream | 1942358 | 2247853 ~ 2266775 (+) |
| AMCG00018106 | NA | other | upstream | 2226567 | 1979046 ~ 1982566 (+) |
| AMCG00018216 | telo2 | other | downstream | 383186 | 4594933 ~ 4604105 (+) |
| G115049 | NA | other | downstream | 549771 | 4761518 ~ 4763905 (+) |
| G115299 | NA | other | downstream | 1737716 | 5949463 ~ 5951017 (+) |
| AMCG00018272 | NA | other | downstream | 1943741 | 6155488 ~ 6160616 (+) |
| AMCG00018280 | NA | other | downstream | 2498735 | 6710482 ~ 6747438 (+) |
