AMCG00018202



Basic Information


Item Value
gene id AMCG00018202
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4192478 ~ 4196034 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00018202
ATGAGGGgAACCCTGTTCAGTCACAGAGAGCCACTGGACCAGGCCTTTGAGCGCAGCGAGGAAAAGGAAAGGTGGGGAGGGCCACTTAGGGCAGAAATCACGGCCTCTCGTCGCCAAGTGTCCGTAGCACAGGCTGATGGGGCATCTGCCCTGCCGCCCGCTTGTCTGATCCCTGGCGAGCCCAGCGCTGCCAAGGCCACGCCTCTTGTGGCAAAGCTTGTCCAGGGTGGCACAGTCACCCTCCGTCAGCGACCACTTTATCACCTGAAAAGATCGGTGCCAGAGAGTCCAGGGATCAGCAGGGCTCACACAACAGGACAAACAGTTCTTGGCAAACACCTGGTGACCGTGCCAGGCCGCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00018202 True 363 mRNA 0.60 3 4192478 4196034
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00018195 NA coding downstream 6567 4172105 ~ 4185911 (-)
AMCG00018192 gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765 coding downstream 67180 4124297 ~ 4125298 (-)
AMCG00018194 NA coding downstream 79648 4111673 ~ 4112830 (-)
AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding downstream 96412 4094987 ~ 4096066 (-)
AMCG00018185 NA coding downstream 125161 4065860 ~ 4067317 (-)
AMCG00018201 NA coding upstream 1 4196035 ~ 4197864 (-)
AMCG00018200 wdr24,LOC106578258 coding upstream 3868 4199902 ~ 4209121 (-)
AMCG00018198 rhbdl1 coding upstream 23787 4219821 ~ 4225283 (-)
AMCG00018199 rhbdl1,LOC102790881,LOC107677126 coding upstream 46244 4242278 ~ 4260750 (-)
AMCG00018206 rhot2 coding upstream 104521 4300555 ~ 4313367 (-)
G114785 NA non-coding downstream 282079 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 790540 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 1051168 3140095 ~ 3141310 (-)
G114681 NA non-coding downstream 1114718 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 1194220 2996035 ~ 2998258 (-)
G114915 NA non-coding upstream 99277 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 189899 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 393261 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 483506 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 624931 4820965 ~ 4821411 (-)
G114838 NA other downstream 105447 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 1544667 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1582999 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 1903616 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 2124894 2006906 ~ 2067584 (-)
G115020 NA other upstream 390028 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 450113 4646147 ~ 4651641 (-)
G115174 NA other upstream 1090352 5286386 ~ 5287873 (-)
G115183 NA other upstream 1104073 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 1160812 5356846 ~ 5366754 (-)

Expression


AMCG00018202 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

AMCG00018202 Expression in each Bioproject

Bar chart with 5 bars.
AMCG00018202 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
End of interactive chart.

Co-expression Network