Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018213 |
| gene name | decr2,LOC107677236,LOC107667207 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 4526000 ~ 4529339 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| decr2 | Predicted to enable 2,4-dienoyl-CoA reductase (NADPH) activity. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be located in peroxisome. Orthologous to human DECR2 (2,4-dienoyl-CoA reductase 2). |
| description |
|---|
| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0006631 | fatty acid metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005777 | peroxisome | cellular_component |
| GO:0008670 | 2,4-dienoyl-CoA reductase (NADPH) activity | molecular_function |
| id | description |
|---|---|
| K13237 | DECR2, SPS19; 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], peroxisomal |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018213 | True | 1128 | mRNA | 0.65 | 8 | 4526000 | 4529339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018214 | NA | coding | upstream | 1662 | 4518463 ~ 4524338 (+) |
| AMCG00018211 | xpo6,LOC106600647 | coding | upstream | 10912 | 4494443 ~ 4515088 (+) |
| AMCG00018204 | LOC104948217 | coding | upstream | 178040 | 4342934 ~ 4347960 (+) |
| AMCG00018203 | LOC106579217,LOC108264572,LOC106578255 | coding | upstream | 229769 | 4295608 ~ 4296231 (+) |
| AMCG00018197 | NA | coding | upstream | 314253 | 4209133 ~ 4211747 (+) |
| AMCG00018212 | NA | coding | downstream | 40494 | 4569833 ~ 4584912 (+) |
| AMCG00018215 | tmem204 | coding | downstream | 81503 | 4610842 ~ 4620287 (+) |
| AMCG00018218 | NA | coding | downstream | 100061 | 4629400 ~ 4639869 (+) |
| AMCG00018217 | NA | coding | downstream | 111819 | 4641158 ~ 4646266 (+) |
| AMCG00018225 | NA | coding | downstream | 202809 | 4732148 ~ 4737892 (+) |
| G114940 | NA | non-coding | upstream | 139111 | 4386180 ~ 4386889 (+) |
| G114888 | NA | non-coding | upstream | 224322 | 4298638 ~ 4301678 (+) |
| G114868 | NA | non-coding | upstream | 327950 | 4194277 ~ 4198050 (+) |
| G114867 | NA | non-coding | upstream | 332004 | 4193342 ~ 4193996 (+) |
| G114806 | NA | non-coding | upstream | 507018 | 4016078 ~ 4018982 (+) |
| G114984 | NA | non-coding | downstream | 59956 | 4589295 ~ 4590074 (+) |
| G114985 | NA | non-coding | downstream | 64121 | 4593460 ~ 4593845 (+) |
| G115061 | NA | non-coding | downstream | 284679 | 4814018 ~ 4814419 (+) |
| G115099 | NA | non-coding | downstream | 565809 | 5095148 ~ 5100938 (+) |
| G115188 | NA | non-coding | downstream | 787114 | 5316453 ~ 5317925 (+) |
| AMCG00018196 | NA | other | upstream | 332670 | 4186410 ~ 4193330 (+) |
| G114551 | NA | other | upstream | 1878226 | 2640846 ~ 2647774 (+) |
| G114518 | NA | other | upstream | 1957062 | 2491313 ~ 2568938 (+) |
| AMCG00018119 | tfap4,LOC107661646,LOC107718566,LOC107553667 | other | upstream | 2259225 | 2247853 ~ 2266775 (+) |
| AMCG00018106 | NA | other | upstream | 2543434 | 1979046 ~ 1982566 (+) |
| AMCG00018216 | telo2 | other | downstream | 65594 | 4594933 ~ 4604105 (+) |
| G115049 | NA | other | downstream | 232179 | 4761518 ~ 4763905 (+) |
| G115299 | NA | other | downstream | 1420124 | 5949463 ~ 5951017 (+) |
| AMCG00018272 | NA | other | downstream | 1626149 | 6155488 ~ 6160616 (+) |
| AMCG00018280 | NA | other | downstream | 2181143 | 6710482 ~ 6747438 (+) |
