AMCG00018214


Basic Information

Item Value
gene id AMCG00018214
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4518463 ~ 4524338 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018214
gtgcagatctgcgcagaactgcgcaaaCTCCACCTACGTGTCCAGCGGAGAGCAGGGCCGTGTGGCGCTCGGTGACTACAGGGTTAATAAACTGACCCACCCCCACAAAAAGCGCCTCTCTGCCTCAGGAGGTGGAGCCGCTGTCGACGGCAGGCGTCCCGTTTAAATGAAATCTGGGGACGGGGCTGGAGCTGCACTTTTTCCTGTTTCTCTGCGCCGACAGCGGCCGGGGGCGACTGTGCAGCCGCGACACAGCGCCGTCCGCCCGGGGGACTCGGCACGGGTTTAGCGGGTATTCAAGTTTTAGTAGCTTTTTGAATTGGACTCGAGCATGGTGCCGTTTCAACGGTATTTACTGCGGAACCTGGTCCTGCAGGGTCGGCGGCATCTGGGTCTGCCGCGGCCGGGGAAGGAGAGCTCTACGCCGGCGTGGGCTTCCGACAAAGCCCGCTCTCCCCCGAGCAGGAGCGGCAGCCTCGGCTACAGCACCAGCTCAGATTCATGGGCTGTAAATGTTCCAATCAATCCCTCCTCTGCGATGAAGGTCATTTGTGCAGCGCTCTCCGCCGTGCCCAGTTGCAGTCCTCTCTCTGAAGGGTGTCGTGCTGGACACACCGGCACCGCGCCGCTCTACGGGGGCCAGAGGCCAGGGAATCCTGGGGCCGAGTCTGATCTCGTCTGGGGACGGATGGAGACCTCCACGCCCGCCTCTGGGCCAGATTCCCACACGAGGGTTGCTGTGTCACGGATCGCGGGGGTGAAGGAGCGCACGCTGATCGCCGTGAAGCCCGACGGGGTGCAGCGCCGCCTGGCCTCGGACGACCTGCTCTCCCAGCACTACCACGACCTCAGCAAGAAGCCTTTCTACCCCAACCTGCTGCGCTACATGAGCTCTGGCCCAGTCGTCGTGATGGTGTGGGAGGGCCATAACGTGGTGCGGACATCCCGGATGATGGTAGGGAACACTAACCCAGCAGAGGCCCACGCTGGGACGATCAGAGGAGACTTCAGTATACACATCAGCAGgaaCGTGGTCCATGCCAGCGACTCGGTGGAGGGGGCCCAGAGGGAGATCCAGCTGTGGTTCAGCCGCAAAGAGCTGACGGACTGGGACTGCTGCGACCACAGCAGCACCTACCAGgtgtaggagagagagagagagagagagagagatggagatgaaggggagaaggagGAAGGGCATCACAGGGACGCACTGCGCCACAGCTACCTCTGTCGACATCCTGTGGTGCTGCCCAGGCCTCCGGACAACGGGCCAGGCCTAGAACCACCCCCTCGCCCCGTCGTTCCCCGGCCGTCtgccacagcacagcacagcacagtgacgCTAACCAGCACCTCACAGAAGACACGCACAAGGTGGTGCAGCTCACGCGTGCTTCCAGGACTGTCAGGAACGGCTTCGGCCCCTTCTCTCCTTCCACGTCAAGATCGAAACGGTGTTCAAATTTTTATATCTATAGATACGATGTTTTATGTACGTAGTAAGGGTACTTTCACACATGGTCCTCGGGGGTTGCATCTTTCCAAGGTGACTCAAATCAGGTGTTCGAGACAACGTGCCAAGGTTACAATCGTCCATTGAAGAGGTCCTGGCGGAAAGGCCGGAGGTCCTGCAGCCCGTGAGGTTTGGAGCTCAATAGAGACGCTGCCCTGACTCACAGGAACCGAAGACGAGCCTCTTCCCCTCTTGGGAAGCCATGACCTAGGGGCAGAAGGGAAGCTGTAGTTTACACTGCCAGTCCAGCCTGGCTCTCTGGAGACGCTCCCTGCCTGACTGTGCCAAATGGGGAAACGAGTTCATATAACCTGCCCTTCGCCTTAattctctgtttttaaataaacttctaTCTGGAATCTCATTGCGAGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018214 True 1893 mRNA 0.59 6 4518463 4524338

Neighbor

gene id symbol gene type direction distance location
AMCG00018211 xpo6,LOC106600647 coding upstream 3375 4494443 ~ 4515088 (+)
AMCG00018204 LOC104948217 coding upstream 170503 4342934 ~ 4347960 (+)
AMCG00018203 LOC106579217,LOC108264572,LOC106578255 coding upstream 222232 4295608 ~ 4296231 (+)
AMCG00018197 NA coding upstream 306716 4209133 ~ 4211747 (+)
AMCG00018189 NA coding upstream 346538 4169235 ~ 4171925 (+)
AMCG00018213 decr2,LOC107677236,LOC107667207 coding downstream 1662 4526000 ~ 4529339 (+)
AMCG00018212 NA coding downstream 45495 4569833 ~ 4584912 (+)
AMCG00018215 tmem204 coding downstream 86504 4610842 ~ 4620287 (+)
AMCG00018218 NA coding downstream 105062 4629400 ~ 4639869 (+)
AMCG00018217 NA coding downstream 116820 4641158 ~ 4646266 (+)
G114940 NA non-coding upstream 131574 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 216785 4298638 ~ 4301678 (+)
G114868 NA non-coding upstream 320413 4194277 ~ 4198050 (+)
G114867 NA non-coding upstream 324467 4193342 ~ 4193996 (+)
G114806 NA non-coding upstream 499481 4016078 ~ 4018982 (+)
G114984 NA non-coding downstream 64957 4589295 ~ 4590074 (+)
G114985 NA non-coding downstream 69122 4593460 ~ 4593845 (+)
G115061 NA non-coding downstream 289680 4814018 ~ 4814419 (+)
G115099 NA non-coding downstream 570810 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 792115 5316453 ~ 5317925 (+)
AMCG00018196 NA other upstream 325133 4186410 ~ 4193330 (+)
G114551 NA other upstream 1870689 2640846 ~ 2647774 (+)
G114518 NA other upstream 1949525 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 2251688 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 2535897 1979046 ~ 1982566 (+)
AMCG00018216 telo2 other downstream 70595 4594933 ~ 4604105 (+)
G115049 NA other downstream 237180 4761518 ~ 4763905 (+)
G115299 NA other downstream 1425125 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1631150 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 2186144 6710482 ~ 6747438 (+)

Expression


Co-expression Network