AMCG00018248


Basic Information

Item Value
gene id AMCG00018248
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5222887 ~ 5225675 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018248
atgtcacTGCTGGTGAAAAGGGCACAAACGTGGGAAATCTCCGAGTCTGAGGCTGAAAGTGATTCAGAGGTTTGTATTGGCAATGCAAGCCCAAACCCAGATGTAGCCAGCGTTTCCCAAACCAGTGACGTCACTGTAGACCAGGGTGATGCACATGTCGACCCACTAGCCATCTCCCCAGACGAGGATGAGGAAGATGGAGACACTTTGCTACTGGcacctgcccctgcccctgccacCCCGAGCCCGGGGAAGAGAAGACGGCGCACCCCTCAGGAGGTGGAAGCAGACCGGATCCGCGACCAGAGCAAGAGGGAAGCCAGAGAAACCCTGAGGAAGGAGAGAGCCAAGctgaaggaggagaagagaCAAGAGCAGCGAAGGAGGAAGGCAGCAGCCGAGCATCTGAAATGCCTTCGACCCGAGCACTGTTTGAAGTATCTTACTGTATGCATTGATCCAGCCGTACTGCAGGACCCTGGCTCTGATGGCCTGCTGGGGACTCTGGATGCGATGGAGTGGAAGAGCACCCTTGAGGAGCAGCTTCTGAGAAACAGCATCGCTTGGAGGAGAGAGCTGCCGCCGACGGAAGAGGAACGGGACCCAGTGGCTGAGGATCAGGTCCTGGTGGTGATAACGCAGAGTGATTTCCTCGATCTGGTCCTGTCCCTGAAGCAGAGTGGGCAGGGAGGTCCCCGGGAGGCTGCGCCGGCCTCCGTGTTTAGCCAGCTGTGTGCGTTTGTGGAGAGAGACCCAGACAAAGTTGTGACACTGGCAATGATCGGGCCGGATCCTCAGAGCTGGACATGGCCCAGAGGAGAGACAAGGGACGAGAAGGCAGCGGGACGGGGCGGGGAGGACATGGATGTAGAAGAGGCACTGGTGTCTCTGCAGCTGTGCTACAACACTGAGGTGCTGTTCCTGGACAGCTGGGAGGAGCTCACAGAGCACGTCTGTGCCGTCACAAAGGCCCTGGCCAAACGCCCGTTCAAGCGGCTGACGGACGGGGGGGAGCTGCCCTTCTGCGCGGAGGGCTCGTGGGCGGCAGGGGTGCGTGTGGAGAGGGACGGCGCGGGGCTGGGCCAGGTGTGGACCCGGCAGATCCAGCAGCTCAACCGGGTCAGCGCAGCCGTGGCCGGCGCCGTGTCTGCCGCCCACCCCTCGCCACAACTGCTCCTGAAGGCGTATCGCGAAGCCGCTTCGGAGCGGGACCGGAAGGGGCTGCTGGCGGACCTTCCCGTGAGGACCGGCGACCGAGAGCGGCGCGTGGGCCCAGACGTCTCTGCCCGGCTATACCGCCACTTCAGCACGGACAACCCCCAGCTGGTCCTGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018248 True 1338 mRNA 0.62 8 5222887 5225675

Neighbor

gene id symbol gene type direction distance location
AMCG00018246 nubp2,LOC102775692 coding downstream 10532 5206383 ~ 5212355 (-)
AMCG00018240 NA coding downstream 51368 5155372 ~ 5171519 (-)
AMCG00018239 NA coding downstream 67713 5149900 ~ 5155174 (-)
AMCG00018232 NA coding downstream 396874 4823825 ~ 4826013 (-)
AMCG00018229 NA coding downstream 436405 4763728 ~ 4786482 (-)
AMCG00018247 NA coding upstream 7945 5233620 ~ 5269405 (-)
AMCG00018245 NA coding upstream 53679 5279354 ~ 5283933 (-)
AMCG00018253 NA coding upstream 85482 5311157 ~ 5322315 (-)
AMCG00018252 dhrs7b coding upstream 106566 5332241 ~ 5342984 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 123963 5349638 ~ 5354923 (-)
G115144 NA non-coding downstream 19014 5153052 ~ 5203873 (-)
G115100 NA non-coding downstream 164301 5036731 ~ 5058586 (-)
G115071 NA non-coding downstream 401476 4820965 ~ 4821411 (-)
G115037 NA non-coding downstream 543138 4679540 ~ 4679749 (-)
G115021 NA non-coding downstream 632819 4589295 ~ 4590068 (-)
G115157 NA non-coding upstream 2305 5227980 ~ 5243187 (-)
G115160 NA non-coding upstream 5943 5231618 ~ 5233417 (-)
G115170 NA non-coding upstream 53411 5279086 ~ 5279296 (-)
G115172 NA non-coding upstream 58399 5284074 ~ 5284333 (-)
G115173 NA non-coding upstream 59270 5284945 ~ 5285516 (-)
AMCG00018220 NA other downstream 571246 4646147 ~ 4651641 (-)
G115020 NA other downstream 634590 4586062 ~ 4588297 (-)
G114838 NA other downstream 1135856 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 2575076 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 2613408 2609145 ~ 2609479 (-)
G115174 NA other upstream 60711 5286386 ~ 5287873 (-)
G115183 NA other upstream 74432 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 131171 5356846 ~ 5366754 (-)
G115320 NA other upstream 724746 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1384958 6610633 ~ 6652773 (-)

Expression


Co-expression Network