AMCG00018251 (natd1,LOC107745813)


Basic Information

Item Value
gene id AMCG00018251
gene name natd1,LOC107745813
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5356846 ~ 5366754 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018251
AGAGTGTGTTGTGCTCTGCTCTCTGTCAGCTTTACGGGATCATGAATCCTCCTCGCCGCAATTTACCCACCTTCCTAGCCCACTGACTACCAATCCGCGATTTTTTTGGCACACAATATGGCCCAGGCAGCGCAGATTAACGTCCTCGATCTCAACTGTCCCATCAAGGTGGAGCACGACCGAAAGCGGAGGCAATTCACTGTTAGATTAAACGGCTCCCACGACCGAGCGGTGCTACTGTACGAGTATGTGGGGAAGAGGACGGTTGACCTGCAGCACACAGAGGTTCCCGATGCCTACAGAGGGAGGGGGATCGCTAAACATCTGGCAAAGGCGGCCATGGATTTCGTGGTTGAAGAGGACCTGAAGGCCCACCTGACTTGCTGGTACATCCAGAAGTATGTGAAGGAGAATCCACAGCCTCAGTACCTGGAACGCATCTTGCACTGACACCGAATCGATGGAGACGGGGAGatgaagggaggaggagagaagggggcTCTATGTTGCTGGAGGATAGGGAGAGCTGGGTGGGG
>TU144300
GAGAGTGTGTTGTGCTCTGCTCTCTGTCAGCTTTACGGGATCATGAATCCTCCTCGCCGCAATTTACCCACCTTCCTAGCCCACTGACTACCAATCCGCGATTTTTTTGGCACACAATATGGCCCAGGCAGCGCAGATTAACGTCCTCGATCTCAACTGTCCCATCAAGGTGGAGCACGACCGAAAGCGGAGGCAATTCACTGTTAGATTAAACGGCTCCCACGACCGAGCGGTGCTACTGTACGAGTATGTGGGGAAGAGGACGGTTGACCTGCAGCACACAGAGGTTCCCGATGCCTACAGAGGGAGGGGGATCGCTAAACATCTGGCAAAGCATGAAGAGAACCTGGAAAACAACAAGGAACACTTGTAGCCAATTCACAAGAGAGGGAATATTGTCTGCTGCTCCACTGTGAATACCACTGGCATTGCTGTGTGCTCGCTCTGTCAGGAGTGTCCGTACTTCATTAAATGGTTGTTTTCCTTCTATTTATGATGTGCCTTTACAACTCAGGACTGGTTATATTAATGCTGTAAATTGAGCTTGTCCTTCTCAGAATCACAGAATTCATAGTAAATGTGAATAAACAcaagtttttctgtttgttgaggtgtattatttgtgtgtatgaC

Function

symbol description
natd1 Orthologous to human NATD1 (N-acetyltransferase domain containing 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018251 False 536 mRNA 0.55 3 5360737 5366753
TU144300 True 633 TUCP 0.47 3 5356846 5366754

Neighbor

gene id symbol gene type direction distance location
AMCG00018250 tmem11,LOC106600685 coding downstream 1923 5349638 ~ 5354923 (-)
AMCG00018252 dhrs7b coding downstream 13862 5332241 ~ 5342984 (-)
AMCG00018253 NA coding downstream 34531 5311157 ~ 5322315 (-)
AMCG00018245 NA coding downstream 72913 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 87441 5233620 ~ 5269405 (-)
AMCG00018258 NA coding upstream 241836 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 374275 5741029 ~ 5745704 (-)
AMCG00018264 rasd1,LOC107653935,LOC107720458 coding upstream 416322 5783076 ~ 5784900 (-)
AMCG00018265 NA coding upstream 427763 5794517 ~ 5808843 (-)
AMCG00018263 NA coding upstream 514792 5881546 ~ 5886000 (-)
G115219 NA non-coding downstream 7216 5345762 ~ 5349630 (-)
G115202 NA non-coding downstream 11712 5344487 ~ 5345134 (-)
G115182 NA non-coding downstream 57343 5299014 ~ 5299503 (-)
G115181 NA non-coding downstream 57989 5298641 ~ 5298857 (-)
G115180 NA non-coding downstream 58341 5297432 ~ 5298505 (-)
G115243 NA non-coding upstream 241079 5607833 ~ 5608069 (-)
G115277 NA non-coding upstream 380704 5747458 ~ 5748359 (-)
G115278 NA non-coding upstream 383029 5749783 ~ 5750043 (-)
G115279 NA non-coding upstream 383338 5750092 ~ 5754022 (-)
G115332 LOC100136012 non-coding upstream 679276 6046030 ~ 6046618 (-)
G115183 NA other downstream 52417 5300107 ~ 5304429 (-)
G115174 NA other downstream 68973 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 705205 4646147 ~ 4651641 (-)
G115020 NA other downstream 768549 4586062 ~ 4588297 (-)
G114838 NA other downstream 1269815 4028016 ~ 4087031 (-)
G115320 NA other upstream 583667 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1243879 6610633 ~ 6652773 (-)
G115581 NA other upstream 2376464 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 3275142 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 3299983 8666737 ~ 8676808 (-)

Expression


Co-expression Network