AMCG00018252 (dhrs7b)


Basic Information

Item Value
gene id AMCG00018252
gene name dhrs7b
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5332241 ~ 5342984 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018252
ATGCTGTTGGGCTCTCCTGTGCGGAGGAGTCTGTCCAGGGCGAGGCTGATGGAGCTGCTGTGTGGAAACTGCCTCCCATTAGTGCTGGGCAGCGTGGGGGTGCTGGTGCTGTACCAGCTGCTGCAGAGACTGCGCCACAAGGCCTACATCCAGGACGCGGTGGTGGTCATCACAGGAGCGAGCTCTGGACTGGGAAAAGATTGCGCCAGGGTGTTCCACGCGGCGGGCGCCCAGCTGGTGCTGTGCGGCCGAGACAAGGGGCGGCTGCAGGAGCTCGTGAGGGAGCTGACCGGGGTGGCAGATGGCAGACGGAAGACCTACACCCCCAGTACCGTGACCTTTGACCTGTCGGACACAGAGACCGTGGCCAGCGCGGCGGAGGAGATTGTCAAATGCCACGGTCACGTGGACATCCTGATCAACAACGCCGGGATCAGCTACCGGGGCACGATCCTGGACACCGCCGTGGATGTGGACAAAGAGGTGATGGACATCAACTACTTCGGGCCCATTGCTCTCACTAAAGCGATCCTGCCCTCCATGGTGCAGCGCCGGAGCGGCCACATCGTGGTGATCAGCAGCGTCCAGGGCAAGATCGCCATCCCCTTCAGGTCCGCCTACGCCGCCTCCAAGCACGCCACCCAAGCCTTCTTCGACTGCCTGCGGGCCGAGGTGGAGCAGTACGGCATCGGTGTGTCCATCTTCAGCCCCGGCTACATCAGAACCAACCTCTCCCTCAACGCGGTCACTGGGGACGGGTCCAAACATGGAGGGTTCTCCTGCAGCCGCCCCTTGTCTCGGCCGGTCAGCCGAGGGGCGCAGAGCTGGAGGAATACAGAGCGAATAAATTAG

Function

symbol description
dhrs7b Predicted to enable oxidoreductase activity, acting on CH-OH group of donors. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human DHRS7B (dehydrogenase/reductase 7B).

NR:

description
PREDICTED: dehydrogenase/reductase SDR family member 7B

GO: NA

KEGG:

id description
K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018252 True 852 mRNA 0.63 7 5332241 5342984

Neighbor

gene id symbol gene type direction distance location
AMCG00018253 NA coding downstream 9926 5311157 ~ 5322315 (-)
AMCG00018245 NA coding downstream 48308 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 62836 5233620 ~ 5269405 (-)
AMCG00018248 NA coding downstream 106566 5222887 ~ 5225675 (-)
AMCG00018246 nubp2,LOC102775692 coding downstream 119886 5206383 ~ 5212355 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 6654 5349638 ~ 5354923 (-)
AMCG00018258 NA coding upstream 265606 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 398045 5741029 ~ 5745704 (-)
AMCG00018264 rasd1,LOC107653935,LOC107720458 coding upstream 440092 5783076 ~ 5784900 (-)
AMCG00018265 NA coding upstream 451533 5794517 ~ 5808843 (-)
G115182 NA non-coding downstream 32738 5299014 ~ 5299503 (-)
G115181 NA non-coding downstream 33384 5298641 ~ 5298857 (-)
G115180 NA non-coding downstream 33736 5297432 ~ 5298505 (-)
G115179 NA non-coding downstream 35059 5296914 ~ 5297182 (-)
G115177 NA non-coding downstream 38308 5293679 ~ 5293933 (-)
G115202 NA non-coding upstream 1503 5344487 ~ 5345134 (-)
G115219 NA non-coding upstream 2778 5345762 ~ 5349630 (-)
G115243 NA non-coding upstream 264849 5607833 ~ 5608069 (-)
G115277 NA non-coding upstream 404474 5747458 ~ 5748359 (-)
G115278 NA non-coding upstream 406799 5749783 ~ 5750043 (-)
G115183 NA other downstream 27812 5300107 ~ 5304429 (-)
G115174 NA other downstream 44368 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 680600 4646147 ~ 4651641 (-)
G115020 NA other downstream 743944 4586062 ~ 4588297 (-)
G114838 NA other downstream 1245210 4028016 ~ 4087031 (-)
AMCG00018251 natd1,LOC107745813 other upstream 13862 5356846 ~ 5366754 (-)
G115320 NA other upstream 607437 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1267649 6610633 ~ 6652773 (-)
G115581 NA other upstream 2400234 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 3298912 8641896 ~ 8648807 (-)

Expression


Co-expression Network