AMCG00018253


Basic Information

Item Value
gene id AMCG00018253
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5311157 ~ 5322315 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018253
ATGGCGTACCTGTTCCCCATCGCGGAGCTGAAACTCATTGAGGCCCAGGAGCAGCAGAGGCAGGaggagctgcagctgcacaagGCCGCATATGTGGAGTTCCTGAATGATCGGTCCCTATTTGACAGCATGTATGATGAAGACACAGAGGCCGCCAAGCTGGCCAACCTACCTGGAGTGTTCACGTTGGGGCTGGAGCAGCACGAGAGGAGGGAGGCCGAGGCCAGCACCTTCTTCGACTGCGTGAGCGAGGCCGTGAGCGACAACCAGGAGAGGGCAGCGCAGAGACTGAATGCTTTCGAGAAGGAGAGGCGAGAGATGTTCAGCAAGCTGCACCAGATGACCGATCCAAAGCTGCTGGAGGTGCGGCCGGCAAAGTGCGTGGAGGAGCTGCACGACAGCCTCATGACCCTGGAGCTTCAGCTGGTCAACCAACTGGAGgacATCACCAAGGACTTTGAACGGAACATCTCTGACATGGTGTCCGGGTTCACTGAGACCTTCACATTCGCCCAGTGCCGAGACCTGGAGAACCACCACCACGAGAAGCTGCTGGAGATCGCCTTGGGAACCCTGGCGAAGGTGGCCAAACATGAACTGCTGGAGGACATGCCTGACGATACCCTTATGCTGCTGGTGGATAAAGACACCGTCATCAGCGCAGTCAGTGCATCCCATGACACACACCTGCTGAAGATCGACCAACGGGAAGATGAACTAGTGACCAGGATCACAACATGGAGCTCTACAATGATGGAGAAGATCCAGAGCAACGAGGTGAATCGAAACTGCAAGCGCATTGCAGAGATTCACACCTACATCGCCTACCTGAGAGACCTGCAGGAGAAACATTAGAGAACCagctgactctctctctctgttacgGCTTTCCGGCTGCGCCTCAGTTACAGgctcctttttcattttgttctgtattgaTAGTCTCTGcttatttcattgttaaaaaaCGTAGTGAGTAGACTATCCGCTAGCAAGGGCAGGAACAAGGGACTGCAATTCCGAGGCCCGGCTGTAGCCACAGCTCTGTCTTGGAGATCTCGCCTGCGTGAGAGGCTGCTCCACCGGCTTGCATCTGCACTACAGGCCACGGCTGTGACTGTTGGTGATGTCGCTCTCCTGTTTCGCTCTTCTCTGGACACGTGTCCTAGTGTGTTTTGGCCCCGCTTTGCCCGGTGGCCACTACCCTCGGACTGCCACACAAGAGGTCCCGCCACCTGTCCGATAGGTGAAACTGTCACGCCACGCGTACCCTGGCAGCCATAGTGGTCACATTGCGATGTCAGGGCCTCCATGTCCTCAATTCTCattccagggagcaggttcagaaccACACGGCTTTGATCCTAGACCGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018253 True 1374 mRNA 0.56 9 5311157 5322315

Neighbor

gene id symbol gene type direction distance location
AMCG00018245 NA coding downstream 27224 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 41752 5233620 ~ 5269405 (-)
AMCG00018248 NA coding downstream 85482 5222887 ~ 5225675 (-)
AMCG00018246 nubp2,LOC102775692 coding downstream 98802 5206383 ~ 5212355 (-)
AMCG00018240 NA coding downstream 139638 5155372 ~ 5171519 (-)
AMCG00018252 dhrs7b coding upstream 9926 5332241 ~ 5342984 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 27323 5349638 ~ 5354923 (-)
AMCG00018258 NA coding upstream 286275 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 418714 5741029 ~ 5745704 (-)
AMCG00018264 rasd1,LOC107653935,LOC107720458 coding upstream 460761 5783076 ~ 5784900 (-)
G115182 NA non-coding downstream 11654 5299014 ~ 5299503 (-)
G115181 NA non-coding downstream 12300 5298641 ~ 5298857 (-)
G115180 NA non-coding downstream 12652 5297432 ~ 5298505 (-)
G115179 NA non-coding downstream 13975 5296914 ~ 5297182 (-)
G115177 NA non-coding downstream 17224 5293679 ~ 5293933 (-)
G115202 NA non-coding upstream 22172 5344487 ~ 5345134 (-)
G115219 NA non-coding upstream 23447 5345762 ~ 5349630 (-)
G115243 NA non-coding upstream 285518 5607833 ~ 5608069 (-)
G115277 NA non-coding upstream 425143 5747458 ~ 5748359 (-)
G115278 NA non-coding upstream 427468 5749783 ~ 5750043 (-)
G115183 NA other downstream 6728 5300107 ~ 5304429 (-)
G115174 NA other downstream 23284 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 659516 4646147 ~ 4651641 (-)
G115020 NA other downstream 722860 4586062 ~ 4588297 (-)
G114838 NA other downstream 1224126 4028016 ~ 4087031 (-)
AMCG00018251 natd1,LOC107745813 other upstream 34531 5356846 ~ 5366754 (-)
G115320 NA other upstream 628106 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1288318 6610633 ~ 6652773 (-)
G115581 NA other upstream 2420903 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 3319581 8641896 ~ 8648807 (-)

Expression


Co-expression Network