AMCG00018256 (LOC101067528)


Basic Information

Item Value
gene id AMCG00018256
gene name LOC101067528
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5623045 ~ 5633788 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018256
ATGTCTGCCAAAGACAACCCCTGTAGGAAGTTCCAGGCCAACATTTTTAACAAGAGCAAATGTCAGAATTGTTTTAAACCCCGAGAGTCGCATTTATTGAATGACGAGGATCTGAACCAGGCAAAGCCCATTTACGGAGGATGGCTGCTCTTAGTTCCGGAGGGGACGGACTTTGACAACCCTGTACACCGAACAcggAAATGGCAGAGGAGGTTCTTCATTCTGTACGAACACGGATTACTACGCTTTGCCTTGGACGAGATGTCAGATGACCcctag

Function

NR:

description
PREDICTED: centromere-associated protein E-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018256 True 279 mRNA 0.48 4 5623045 5633788

Neighbor

gene id symbol gene type direction distance location
AMCG00018257 LOC108274018,LOC108413479,LOC107602438,LOC108437874,LOC107719913 coding upstream 18896 5591847 ~ 5604149 (+)
AMCG00018255 LOC106933195,LOC107091042,LOC103143274,LOC106958689,LOC108237146,LOC107388092,LOC103481993 coding upstream 94473 5527286 ~ 5528572 (+)
AMCG00018254 LOC108274084,LOC107090247 coding upstream 230563 5381051 ~ 5392482 (+)
AMCG00018249 NA coding upstream 318592 5286386 ~ 5304453 (+)
AMCG00018241 mfsd1,LOC107667128,LOC100697574,LOC107752991,LOC101471794,LOC107085018,LOC108237128,LOC105030909 coding upstream 344120 5271199 ~ 5278925 (+)
AMCG00018259 NA coding downstream 54517 5688305 ~ 5738824 (+)
AMCG00018261 NA coding downstream 114281 5748069 ~ 5750422 (+)
AMCG00018260 med9 coding downstream 143988 5777776 ~ 5777991 (+)
AMCG00018266 NA coding downstream 256386 5890174 ~ 5904487 (+)
AMCG00018267 NA coding downstream 301251 5935039 ~ 5948592 (+)
G115201 NA non-coding upstream 278098 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 305120 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 522107 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 808626 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1029200 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 412242 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 891931 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 984390 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 1020334 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 1024745 6658533 ~ 6667223 (+)
G115049 NA other upstream 859140 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1018940 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1429715 4186410 ~ 4193330 (+)
G114551 NA other upstream 2975271 2640846 ~ 2647774 (+)
G114518 NA other upstream 3054107 2491313 ~ 2568938 (+)
G115299 NA other downstream 315675 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 521700 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 1076694 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 2259839 7893627 ~ 7894449 (+)
G115648 NA other downstream 2485990 8119778 ~ 8122171 (+)

Expression


Co-expression Network