AMCG00018259


Basic Information

Item Value
gene id AMCG00018259
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5688305 ~ 5738824 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018259
CCCAGTACGCTGCCCCAGGGCACCATCAACATGAACCAGTGCTCAGATGTGATTGATGGGGAGGCGCGGACGGGCCAGAAGAACTCCCTGTGCATCCTGACGCCCGAACGAGAGCACTTCATCCGAGCGGAAAACAAGGAGACCATCAACGGGTGGTATGAGACGCTGATTGTTTATCCGCGGACTAACAAGCAGAACcttaaaaagaagagaaaagtgGAGCCACCTACTCCTCAGGAGCCAGGACCTGCCAAGGTGGCGGtgaccagcagcagcagcatagCTTCTGTGGAGAAGGTGCCCACCTGCAAGTCCACCCTGTggcaggaggagaggagagcgaGGGGTGGCATCCCTTGCAGTCGAAGTGCCTCCTGTCTTAGCCAACTGAGCCAGGCCAACCACTCCCAGAGCAGCACGTCCTCCACAGCCAAAGAAGAGCAGGCCGTGGTGAATGGCGGACGCAAGGCTCGGGTAGAGAGCGGCTACTTTTCCCTGGAGAAGACCAAGCCGGACCCTCCACCCCTGCAGCAGCTCCCTCTGGCCACCTCCTCCAGTCCCGGCGGCCCCGACAGGTACAGTTCCCCCGACACGGACCCCCTGACCTCCCCGCCCTGCCGCTCCCCCGACTGCGGCGGCGGCGACCCCTTCCTCTCCCCAGGGCCGCTCTACTCCAATGGCTCCTCCGCCATCAGCTCCTCGCAGAGCTCCCTGGACTCGGAGGTCAGCAGCACCACACAGACCAGCGGCGCCAGCTGCGAGGGCCAccggggcgggggggtggcCGGTGGCGGCGGCAGTGAACGAGCGGGGCGCATGGGCCGCAGTGCCAGCGACTACGCCTGCCTGGCCGACGTGCCCAAAGCCAAGAGGATAAGCCACCGGGACGCCTTCCGCGCTGAGAAGAAGCGGCAGGAGCAGAGGTCCCGTACGCGCAGCCCCGGCAGGGAGGAGGTGGCCAGGCTGTTCGGCCAGGAGCGCAGGCGGTCCCAGGTGATTGAGAAGTTCGAGACGGTGGACTCGGAGAATGCGGAGCACATggagaccagctcctcctccgaGCAGCCCGCCCTGGCAGCCAGCGTGGCTCGGCAGGGCCGCAGCGAGAGACGCCACTGCCCCAAGAAACAGGAATTCTCTCTGGACAACTCAAGCGAAAGGTCTATGCCCGACGTCTCCACCTCCACCATCTCCCCGTACCGCCGAGCCAAGTCCCTGGACAGGAGAGCCACCGAGTCCTCCATGACGCCTGATTTATTGAATTTCAAAAAAGGATGGATGACCAAGCTTTATGAGGATGGGCTGTGGAAGAAGCACTGGTTTGTCCTGACAGATCAGAGTTTGAGGTACTACAGGGACTCCATCGCAGAAGAGGCAGCAGATTTAGATGGGGAGATTGACCTGTCCACTTGCTATGATGTCACAGAATTCGCAGTCCAGAGGAACTACGGGTTCCAGATTCTTACTAAAGAAGGCGCCTTCACCCTCTCTGCCATGACCTCAGGTATTCGACGCAACTGGATTCAGGCCGTCATGAAGAATGTCCGTCCCACAACCGCCCCTGATGTCACCAGTTCTCTCCCCGAAGAGAAGGCCAAGGCAGCCTTCGTGAGCAGCCAGGCCCCCGCCGAGACCCCCGAGAGCTCGGCCGGCACTGAGGCAGAGGGCAGCAGCTCGGAGCAGCGGCGGAGCCGGGTGCGTGAGCGCAGGAGAGAGGGCCGCTCGAAGACCTTCGACTGGTCCGAGTTCCGGCCTGCGCAGGAGAAGGGGGATGAGGAGGGGGACGCGGCCTCTTCCCCTTCGCCTCCCAGCTCTGCCTCCAACGCAGCCCTCCAGGACCCGGGCGATGCAGGGGAGCTGGAAAGGGAGCGGGCGCGGCGCCGGGAGGAGAGGAGGCGGCGCTTTGAGACGGTGGATGGCAGCTCCGAGGACAGCAGCCGCATGGAGGTGGATCGGTCCCCCGTGTCGTCGTCTGTGTCCCCCGCATCGTCGTCTGTGTCACCCGTGTCGCCCTTGTCCTCCatctcaccccccaccccagaggATGGCAAGGGCCCGGATGTCCATGTGGAAATTGAGCAGCGCTGGCACCAGGTGGAGACCACCCCCCTCCGAGAGGAGAAGCAGGTGCCCATCGCCACGTTGCACACCTCCGAACCCGGCGCAGACCGGCTGCCTCCCCAGGAGCTGGCAGCTCTGCTGGATAGAGagCTCGAGCAGACCCAGAAGGAGCTGGCCAAGCTGCAGGAACAGAACAGCCTCCTCCAGGACCAGCTGAAGGAGGCGCGGGGGCGAGAGCTGAGCGCGCGAGAGGGCTACGTGCTACAGAATGACTCCTCAGCTTCACCGACGGGCGCATGGCAAAGGCTACACAAACTTAACCAAGACCTTCAAAATGAGCTGGAGTCCCAGAGCCAGCGCCAAGACCTCACAAACCAGCAAGTTCAAGCCTTGAAACGGAACTACAGTGAAGCCAAGGACGTCATCAGACACCACGAGTCAGAAATCCAGAGTCTACAGACCAAACTCAACAATGCCATGGCCGAGATTCTGATAAGTGAGCAAGCAGTGGCCAAAATGAGGAGCGAGCTGAAAATGGAGCAGGAGAAGTTCAAAGAGCGCATGGAGGAATGGGAGCACAACGAACAGACCCTTCGGACTCAGCTGAAAGACAGTGAGGACAGACTGAAGGATGTGGAAGCCCTGTTGCTGGAGAAGAGCCAGGCTTTTAGGGATCTGGAGAGGCAACAGGCCCTGCAGAGGGACTATCTTAAGGAAGTACAGAGGCTGCAAGATAGGCTTGCAGAGGTTACAAACCAGCTGATAACTACTGAACAAACACAGACCTTGAAGGAGGAGAGGTTTCAGAGGAACTATGAGATGCTGAAGGAGAGtcaggagaaggagaaggagtcTCTTACTCGAAGGCTGGTGGAAGCGGAGGGGAAAGTTAGAGAATTGGAGGACAGACTTCAAGAGGCAGAGCAGCAGGTAGAAGACCTGCTGAAGGAGAAACGGGCTACTGGTCTGGAGAGCAGCGAGGTGGTGCACCAACTTGAGGAGCAGCTGGCCATCAGGACTTCCACTATCCAGAAGCTCACGGAAAATATCCGGGAGTTGGAAGAAGAGAAGGACCAGTTGACCTGTAGGTGCCAAGAGCTGATAAACCAGATAACAGAGGCCGACAACGAGGTAGCCAAGCTCCAGTCTCGACTGAAAACTGAGGAGACTGACTACTACAACCTGGAGCACTCCTATGAAAAGGTGTCGGAGCAGTTCCAGAAGATCAACAAAGTTCTACGAGAAAAGGAAGAGGAGATCAGGGAAGCAAAGGAAATGTATGAGAGGCTGGTGGAAAAGAAAGAGCAGGACCTCAATGAGGCACTGGTAAAAATGGCTGCTCTGGGGAGCAGCTTGGAGGAAACGGAGATGAAGCTGCAAACAAAGGAGGAACTGTTAAGCAAGATGAGTCATGACGAGATGGATAGTGACCCAGAGAAGTTTATTTCAATTATCCATTCGCTGGAGACCAAACTATACGTGACCGAAGAGAAGCTCAAAGAGATCACGTTAAAGTTGGAAGCACAACAGGGCAGACAGCTTGAGTCAATGATCGAACGCCATAGCCAGTGGGCAAAGACTGAAACTGAGCTCCAAGGGCAGCTCAGCGAAAGTCTGTCCAAAGTAGACAAGCTGACCACACAGCTCCAGGAAGAAATGGACAAGAGAAACACATTTGCTCAGGAAACCAGCTGCTGTATCAAAGCAGTGAACACCAAATATGAAAAGGCCCTCGCTTGTGTAGAATCGAGCAGGGAGAAAGTCCACTCCATCATTAAGAGCCATAAAGAGGATAGTGCAGATCTAAAGCTTCACACATTATCAGAGATCGAGACACAGTTAGTTAATGCAACCATTTATATTAGGCAGGGAGGAAGCTCATTAGTAGAGCAGCAGCTTAAATACCAAGAGACACCAAACAGGGAGCTGAGCGAGAGCGAGATGACCGACGAGGACAGGATCAAGCTGTTTGCTAAAACCTTAGCCTTTGAGGCTTTGGTTTTAAACAAGATGGCATTCTCGATACAAAATCCCAATTTCGACCTTTTGCAGGGCCTTAGCGCAGTCCATCAGGAAGCAGAGAAGTTGAAAAGAAGCGACGAGTCCTACGTAGCGATTGTATATGCAGATGTCTTAACTCAAAAGCTGATGTTAGAAAGTGAGTTTTGGGCCGAGGTGGAGAAGCTGAAGACGCAGTTTGAGGAGAGGGAAGGCGACTTTGACAGGGTAATTCAAGAGGTGACAGATGAGTTTAGTGCAGAACAAGGTAGAACCCTGGCCGATATCAGTCCTCCGGAACTTGCTCCTTATgtggaacaaattaaaatggaggaGGCTCATCATTTAGCAGAACAAATCATTGACCGACACCTCCAGACAGATTTGCCTTCCTGTAGCATCGATGCTGTCGATTCTCCACACATTGGACGGGACAAACTAGCAGAGGAGCTGAAACGGCAAGCGGAGATTCTCCACCATTTATCCCAAGAAATAGAGGCCACTTGTGATGCAGAGGACAGCGATGTCCCCCACAGGTTAATTGACATTTCCCGTGTACGGCCTTGCTACACACACCCCAGCAACATGGACAACAGTTCGCTCTTCATGCGGGAAGCCATGGTTCAGGCTCAGATCGCCTACGTGGCTTGCAAGCTAAGAGCGGACCATGAAAAAGATTTACAGCAGTGCCGGGACGCCTGCCAGAGCATGGACATTCTGTGTCAGGAACATGCCAGGAATGTGAATGCCATCCGTGATCGCTACGAAAGCTCCCTGCAGGAGGAGCGGCAGAGCTTCTCGCAGGCAGTTTCTGGCCTCAAGGAGGAGAACGAATCCCTGAGAGGAGAGGTGTCCCGTCACATGTCTGAGCTCTCTCTGCAGCAGGAGCGGCTGCAGCAGACAGAGCAGCGCTTCAGACAAGAAATGGAGGAGCTGAAGCAACGGTACCAGCAAGAGCTGCAGCAAGCGGAGGAGAAACGGGCGGCAGCCGAGATGGCCATGAAGGACAAGACTGCAGAAAGCCAGCGGAAGCTCGAGACCATACTGTTAGACATCGAGAACATGGAGGACAGGCACGAAGAGCACGTGCAGAAGCTGGAGGACAAGTTTCACTGCAAGATACAGGAACTGCAACGGATTCACGAGGAGGAAATGCAGAGGTTGCACGGCCACTACACTCAGACCATCAAAGCCATGCAGGAGACCCTGGAAGCATTGAGGTCCAGGCACCCAGAGGATCCGCCCGTCGAGTCTTCCACGCCTCCCCAAGACTCCTGGCCCATGGAGGAGGCGGACGGGACGCAATCTCCAGTCAGAAGGATGGAGCTGGATTCCATGACTGTGCTGAAGGACAGGATCCAAGAGCTGGAGACGCAGATGAACGTCATGAGGGACGAGCTGGAGCACAAGCACCTGGAGGGGGACGTGTCCAGCCTGAAGGAGAAATACCAGAAAGACTTTGAGAACTTAAAGGTTTCTACACATTTTGTTCTAGTCTTTAGACAGGCCACTTGCGAGCGGGGCTTCACAGCCATGGAGGAGACGCACCAGAAGGTCATCGAAGACATCCAGCGGCAGCACCAGAGGGAGGTGTGCAAGCTGCTGGAGGAGAGGGAACGCCTACTGGCTGAGGAGACGGCTGCTACCATTGCTGCTATCGAAGCCATGAAGAACGCGCACcgggaggagctggagaagaaCCAGCGCTCCCAGATCAGTGGCATGAGCTCAGACATCGACGAGCTGAGGAGACAGTATGATGAGGAGCTGCGGTCCATCTACCGAGAGCTGGAGGTCCTGTCAGAGCAGTACTCCCAGAAGTGTCTGGAGAACGCACACCTGGCGCAGGCCCTGGAGGCCGAGCGGCAGGCCCTACGCCAGTGCCAGCGCGAGAACCAGGAGCTCAACGCACACAATCAAGAGCTGAATAACCGCCTGGCATCGGAGATCACCCGACTACGGTCCTGTATCACTGGGCAGGATGCCACGTCCCCCCTCACGCATGGCAAGGACATCTACGAACTGGAGGTCTTATTGCGGGTCAAGGAGTCAGAAATCCAGTACCTTAAACAGGAAATCCACTCCCTCAAAGACGAGCTCCAGTCGGCACTGAGGGACAAGAAATATGCCACGGATAAGTACAAGGACATCTATACAGAACTGAGCATAGTGAAAGCTAAAGCCGACTGTGACATCACCAAGCTAAAAGAGCAGCTGTTGGCGGCCACCGAGGCTCTGGGCCAGAAGACGGCGGACAGCACGGCGGTGTCCGGATACGATATCATGAAATCTAAAAGCAATCCTGATTTCCTCAAGAAGGAAAGGTCAACCATCAGCCGGCAGATTCGAGGGGTGAGGTCGAAGAGCCTGAAAGAGGGTTTGACAGTGCAGGAGCGTCTGAAACTGTTTGAAGCAAGAGACTCCAAGAAGATCTGAGCACGGTGCCCCGGTGCCATCGGGACTCAGCTCTCCCTGGTCTTCTCTGCAGGGCTGTGGCCAATTTCGACAGCTTATGAACGTGCGATTCATTTCAAACCcattaaacacacactcaacacataCAACCAGTTGGTTTTTTAGCAGAGGGGTTCATCGGTGGCCATAAGTTTACCCTCCTGTCTTTTCAGTGCAAATTGCCCACATACTATGACTATGTAACGACAATATCTGTGAATAAGTAAAGAAGATTATATATTCCTTTAAGCTTGGGTTTATCTTGGAAATTTTAAATCTGAGTAAGAATCGAGAGACAGAACCTGTCCAGTgaagtttgtgttattttgtgacGCATGTTCATTTCAAAGTCAGAGATTTTACACAACCGGTAGAGCCATTGATATGAGTGTGTCGAATTATCTTTGCATTGAAAAGAAAGGAGGATGTGCAACTTTTTGTCCCCTACTTTGACCAGTCCTACACCGTGTCCATCATTTTTCTGGAACTGTTTCACAGATACACTCGTTATTAACTGGCCATTTCTCCAGTCTCAACATCTTCCTGCTGACTGCTTTTGTGCATTTACGTGACGCTTCCAACCTGTGGGAATCCATACATATTGAATCTGAAGTCTTCCTgcacatgattttattttactctaaaGAGATTTCCAAAAGGAACTCGGTTGATTTGATACATTTGCAAAAACGTTTTCCCCGGACAATGGAGCTCTGACGCTGAAGGATTGACATccgccttttattttttcttttgtctccaTTGTTATAATTTAGGAATACAGTCTCCATGACTCTTGTTTTggacatatttattattatttattaaaaaggaaaacacataaGATTGGGATTAATTTTTTCGGGTGAAATAACAGCtgtacaaaaatgaaagaaaggaagaaaacagtTATGATGAGCAGCTGcatcaaaataaatctgaaaccATGCAGGAAAGTATGTGTGCCCAGTCCCttaaagcagtttattttccaGGAAGTCTTGATGATAAATTGAAAAGTCTTTGaaatctttgtttgttttttggcccTTGTGATAATAAGGCATATTATTACTATAGTAAGTTAACCAATCAAAATTGAATGACACGGCATTACATTTTACCAGAGCTTACCCAGTAAGTATGAACTCCTGCGGTGTTCTCTCCAAACCCAGACTGATTTACTAAATCCGGgagaattcatgttttaatctcataACAATCTAGAATGATgtgagagaaaataatattctaccaaaaaaccaacaaaaacagaaaaggattaatgcattttgatttagtttGCCTTTCCTTACTTATATGCCAATAAAAGCGGTTCAGTCAGCCCTGTCCCAAGGAAAGTATTtgcaaacagttttaaaaattctatcagtatatattatataatattttaagtgtAAAGCTTGTAGCGGTGGAAATATAATGTAGGGGCTGCATCatatcaaattaatattgtaaatcaATCTAGGGGAAGGGTAGAATAAAATGATTGTGGTAATATTAAGAGTATACTGAATCCTGAATTAAATCCATTCTAAACCTATCTAATAATTTTTTAACGCTGCTTAATGCACTGCAGGGAAACGATTAGTATGAAGACTACACAACACAGATAGTGTTCGTATCGGTTTTGTTGTGTGCCTCTTCTACGTTCTGCCAGAACTCACAGAGACAGTGTTAACGCACATTAAACCATGTTGATCTGCGTCCTCTAGAGGAGTCGACGCTGTCCGAGAGTAGCACAGGTCGACGAAGCTTCCATTCGGAGTGCTAATGGGCTAAAAGAGCATTAACGGTGTCCCCTCTCCATGCCAGGCCGTCTGACACACTTACTGCGTAAACTGCTGCTCCACTCACTCAAGCTCTTCGCTTCACAGTTATGAAATGTTGTCTAActttctaataataaaaaaggaaactgtaTAGTATTCAAAGCACGCcttgtaaatatttgttacaCAGAATCTAGTTTTTGTGATTTTATCTGTTTTAAATCTATATCCTGCTACTagcactataaatatatatatattttttattttggtttgaatGTATTCTCTGAAAGAGGCAACGCGTCTCTGACTCGGACCACTTCTGAAATTCAAAGTCTTGGCAGAGGACCCCACTGTGCACGTCGCCACAAAAGGCTCTTGTGTTCGAAGTGGCGTCGACATTATACTGTCCGAAGCGCGTGGGCGGGGAAATCCGTGCTTTGGGATTTTATTGGAAAGCGAGATCCTGAACTCTAAACGTTCTGCCACAGATCTGTGCTTTGCTAACGATTTGTGCTGTGTGACCCGTCACTGGCTGACCCTTCACTCATTCACAAGCAAGGCAATATGGCATCATAATATGGATAATAGATTAAACAGGAAACACAGCCACCAAGGTCACTGATTCGCAGTCTTCTAGTGCGGTGAGCTAATGATTAACCATCTCCGAGTGGTGGTCTGCAAGGGGGATTCCCCGAATCACCGTTGAATCCTGAGAAAGTTTGCAGCACATCGCAGTGTTCAAGGGTGTGAAATTACAGAGCTGCTCGTTTTAATGTGTAAACGTGTGGCTTTTTGGCCGCCAGCTGCCATAGTTCTAGTCTGTATCACCTGACagttaattccttttttttacatttttcttttgcaattaaGCTTAAAGGATTTTATTTCTAGTTCTGTATGTGGTGCTTGGGAATGATACAAGTGAAGATTTTGCAGTGATATTTacagcaaatacatttgaagatctttttctgtttagtttgtgtgtgtgtaagctaAAAATGAAGCGTCTAGGATGGGACATTACAGAGAATGACATGAATCCTAAACGTGCACCTTTGTCTGTGTGTCGAGGAAACTCAGGaagttgaaattgaaatgtgtatCGCTACTGCAAACACAAGCATCTGAGTGAAAATGGGAAGATTCTGCATCTGCTGTCGGGCTCTTTAGTGTTTTATGATCTTGAGAATTAAGATTAAagttatgttattgtttttttcagctttagtagtatattgttttttgcagttttgtgtCCCTActtttctgctgttgtttttatttgtttttgtatatctTCTGGTAATAAGTTTTGAATGCCCCAGATGTTCAAGCCTTCAGGAATGGGGAGTTCAGCaagttgaaatgttttaaagcgTCTGATCATTATTCAGTGACCCTCCCATCTTCCAGAAGTGAGAaatctcctctcctcttctgaCACGatacatttgaatttcagaAAATGGTCGGGTCTGATGTGTCAGTCTCCACATGAAACAGCTCGGTGACAGTGTTGTCCTGGTCTACTTTATTTTATGCCAATTAATTGTTCATTGTAATTGGAAACCTCGCTCatcacatatttatttctggacTGTATGGCTTTTTATTAGATTTGTGGTTTtagttgtcatttttattttgtaaatatgaaaaCCCTACTTTATATAATCtataacagtaataaaatatttttgcaccatctaca

Function

GO: NA

KEGG:

id description
K23792 MPRIP; myosin phosphatase Rho-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018259 True 10026 mRNA 0.50 23 5688305 5738824

Neighbor

gene id symbol gene type direction distance location
AMCG00018256 LOC101067528 coding upstream 54517 5623045 ~ 5633788 (+)
AMCG00018257 LOC108274018,LOC108413479,LOC107602438,LOC108437874,LOC107719913 coding upstream 84156 5591847 ~ 5604149 (+)
AMCG00018255 LOC106933195,LOC107091042,LOC103143274,LOC106958689,LOC108237146,LOC107388092,LOC103481993 coding upstream 159733 5527286 ~ 5528572 (+)
AMCG00018254 LOC108274084,LOC107090247 coding upstream 295823 5381051 ~ 5392482 (+)
AMCG00018249 NA coding upstream 383852 5286386 ~ 5304453 (+)
AMCG00018261 NA coding downstream 9245 5748069 ~ 5750422 (+)
AMCG00018260 med9 coding downstream 38952 5777776 ~ 5777991 (+)
AMCG00018266 NA coding downstream 151350 5890174 ~ 5904487 (+)
AMCG00018267 NA coding downstream 196215 5935039 ~ 5948592 (+)
AMCG00018268 NA coding downstream 213445 5952269 ~ 5963749 (+)
G115201 NA non-coding upstream 343358 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 370380 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 587367 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 873886 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1094460 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 307206 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 786895 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 879354 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 915298 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 919709 6658533 ~ 6667223 (+)
G115049 NA other upstream 924400 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1084200 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1494975 4186410 ~ 4193330 (+)
G114551 NA other upstream 3040531 2640846 ~ 2647774 (+)
G114518 NA other upstream 3119367 2491313 ~ 2568938 (+)
G115299 NA other downstream 210639 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 416664 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 971658 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 2154803 7893627 ~ 7894449 (+)
G115648 NA other downstream 2380954 8119778 ~ 8122171 (+)

Expression


Co-expression Network