AMCG00018265


Basic Information

Item Value
gene id AMCG00018265
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5794517 ~ 5808843 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018265
TGGGCTGCCGTTTAATAACTTATTCGAAGCCTGTTatatttcattctttttaatgGCGTGGTCTGTCTTTCTTGCAGCATTACGGTGGCTATGACGTCCCAGCCGAAGGCAGAGGTGATGGGGACGTCTCCGGTGTTTTATTGTGGAGTGGTGCTGCTGGTCACCGGCTCTGTCCTTGTAGTCAGCAGTTTCTATGCTCTGGGATTCACGGGAACCTTTTTAGGTGACTATTTTGGGATCCTGAAGGAGAAGAAGGTTACAGGATTCCCCTTCAGTGTCTTGGATAACCCGATGTACTGGGGGAGCACAGCTAATTACCTTGGACTGGCACTGATACCATTCACAGAGGAAATCTATCGGCAGAAAATCAGATGCTCAAAGAACAAATAAGtacatctgtgtttgtgtacgGATTAGCGAATTTTAATCCAACAAATGACCCCGAAAACGACCAACCCCAAGGAAGGCTCTGAATACTGGTCTGCTGCTTCCTTATCTCACTTCGGTTATAGATACTTCAACAGCCTACATGCACATCAGGGTTTAATAAATGGGATTTAGTCTGTGTGAAGGAAAAAGGcctcaaatattttaatcagaactatgtggaatattttatttattatatttattttacaaaatggaaGCGTTTGTTTAGTCTTGTGATAATGAGAATATTTGCTATGGTTCTGTATTCactcaaaaaatatataatttttggtTCCATCATGCAACGTAAATATCTGTGAGACATGTTTATTCAAGTTAACGAGATAACATGACATGGCATAAAAGTCTGTAAATGTATACGCTGGGAGATGTGTTTGAGTGCcgtggaaaacaaaatgagcaagaTGACCTTtagctgctgtttatttttatttatcccCCTGAATACGATGAATTAATCACTAAAACGATCGGTAATCAAGTCAATGATGAGTCTGAATTAGGCAGCTGACATCTCCACTGTGAAGACAGGCGGGAGAAATGACCTGCGATTTGAATACCCTGGATAAAAATGATCACAGAGGCCTCGGTAACGGGATGTCACAAAGCCGAAGGAAATCCACTTAGCTATGTAATGATACTGTTATGGTGATGATTTGTTCCCAAAGTGACCTACAAGGAAGCAGAAACAGTGTTCAAAGTCAAAATCTCTCTCATcaagattataattatttattaaatgcattttttaagtgGGTTCAGTAGCGCAGATTCCCTATGTGAAGCCGAAGTCTTAttacacacatacgcacacccCCAGAAGGCAGTGTAAATCCAGTATTTTATTGATACATTCATGACTAAGATGTTAACTGGAGTTcataaaaagaagaaattatGTCTGCGGTGTTCAGTTTATTGTAAAGTATCcattttattgatgatgtggCTCATCAAAGCAATAGAACTAGAaatgtctgtattattttccttaGCACAAAACTATTAGCCAAATGTTTGTGGTGGCTGAAACAATACTCTGGGTTTAAGTATGTGGATTAGTTTTACAGTTACactttatatataacatatttgagtattattttaaatgtccaaaTTACAATTCTCAAATGTCACgtgtttaaattgcattttgaacAGTTGTAGTTTTACTATAAACTataatgtgaaacaaataaaatgtgccCGGGCAATTACGGAGAACCTGGTAAACGCAGGGCTGCATCAGGAGGCGACTGACGGAAACATTTCCTGTGACAACGTGCTTCGAAAGTCTCAAAATCTCCCCAAGGTGTGCAAGCTATGTGGCGTCCTCCGCACTCAACTCTTCATCGTTGTGTGTGACTATTGCTGTACTGTTATAATAGATCTGATCGGATGTTCTTGTATAAGAGTGCTTCTAATTTTGTAacttttaaatcataataaagtCTGAAACTCCC

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00551 PEMT; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018265 True 1913 mRNA 0.39 3 5794517 5808843

Neighbor

gene id symbol gene type direction distance location
AMCG00018264 rasd1,LOC107653935,LOC107720458 coding downstream 9617 5783076 ~ 5784900 (-)
AMCG00018262 cops3 coding downstream 48813 5741029 ~ 5745704 (-)
AMCG00018258 NA coding downstream 182042 5608590 ~ 5612475 (-)
AMCG00018250 tmem11,LOC106600685 coding downstream 439594 5349638 ~ 5354923 (-)
AMCG00018252 dhrs7b coding downstream 451533 5332241 ~ 5342984 (-)
AMCG00018263 NA coding upstream 72703 5881546 ~ 5886000 (-)
AMCG00018274 clec16a coding upstream 259460 6068303 ~ 6124832 (-)
AMCG00018289 NA coding upstream 319870 6128713 ~ 6155791 (-)
AMCG00018292 nubp1,LOC107690260,LOC107590599 coding upstream 349437 6158280 ~ 6182812 (-)
AMCG00018286 NA coding upstream 411130 6219973 ~ 6231007 (-)
G115279 NA non-coding downstream 40495 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 44474 5749783 ~ 5750043 (-)
G115277 NA non-coding downstream 46158 5747458 ~ 5748359 (-)
G115243 NA non-coding downstream 186448 5607833 ~ 5608069 (-)
G115219 NA non-coding downstream 444887 5345762 ~ 5349630 (-)
G115332 LOC100136012 non-coding upstream 237187 6046030 ~ 6046618 (-)
G115395 NA non-coding upstream 408685 6217528 ~ 6219216 (-)
G115534 NA non-coding upstream 1192959 7001802 ~ 7002005 (-)
G115577 NA non-coding upstream 1925254 7734097 ~ 7734384 (-)
G115579 NA non-coding upstream 1933131 7741974 ~ 7742210 (-)
AMCG00018251 natd1,LOC107745813 other downstream 427763 5356846 ~ 5366754 (-)
G115183 NA other downstream 490088 5300107 ~ 5304429 (-)
G115174 NA other downstream 506644 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 1142876 4646147 ~ 4651641 (-)
G115020 NA other downstream 1206220 4586062 ~ 4588297 (-)
G115320 NA other upstream 141578 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 801790 6610633 ~ 6652773 (-)
G115581 NA other upstream 1934375 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 2833053 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 2857894 8666737 ~ 8676808 (-)

Expression


Co-expression Network