AMCG00018282


Basic Information

Item Value
gene id AMCG00018282
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 6688637 ~ 6704131 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018282
atggAACACATCATTGTGGCTATGCAAGATCCTGATATGGGGATAAAAATGAGAAATCAGCGGCTTCTTATTACTGTGATCCCACATGCAATGACAGGAAATGATATCGTGGAGTGGCTAATTCAAAAGTTTTCCATCACGGAAGAAGaggcTTTACATGTGGGTAACCTCATAGTCAAGTATGGATACATTTACCCACTGAAGGACCCAAAGACTCTCATCCTCAGACCCGATGAATCTCCATACCGCTTTCAGACTCCTTACTTCTGGACCACAAACAAATGGCCGGCTTCAGAACTGGACTATGCGATTTATTTGGCGAAGAAGAACATCCGAAAACAAGGAGAACTGATTGACTATGAGAAGGACAATTACAATTTGCTGCATAAACGGATTAATCACACCTGGGACTTTGTGGTGATGCAGGCCAGGGAGCAACTCAGGGCAGCGAAGCAGAGGAGAAAAGCAGATCGCATTGTACTGGAATGCCAGGAGCAGGCCTACTGGCTAGTCAACAAACCCCCAGTAAGTCACATGCTCACCATGCTTTTGTTAGGCAGAAGCCGGTTAGAAGTCCCTGGGGCTTTTGATATTCTGGAACATGGTCCAGAAAGAAGAAACTGTCTCAACTCCCGAGTCCAACTGGTTAAAAAGAACAGTGAATACTACAAAAAAGAGATTGAACACACCAAGAAAGCCCTGGGACGAACACGAATCAAATCCTCAATCTGCCTCGAAGGGTTTGTGAAGTTCAGTGAACAGTATCTGTCCCATGACCCCATCATGCAAGGCTGCCTTCCCAGCAACCCCTGGATAACAGATGACGCCATGCACTGGTCTATGAATGCAGACTTGGTGGCGACTCCCACCAAGATGAGGGTGGAGCGCTGGGCCTTCAGTTTCCCAGAGCTTCTCAACGACCCTCTGGGGCGGCGCGAGTTCCGGCAGTTCCTGGAGAAAGAGTTCAGCGCGGAGAATCTGTGCTTTTGGGAAGCCTGCGAAGATATCAAACATGGAGAGAATTCCAAAATACCACAAAAGGTGGAAGAGGTATACCAGCACTTCCTCGCCCCGGGGGCCAGCAGGTGGGTGAATATAGACAGTAAAACGATGGAGAAGACTCTGCTGGGCATCAAAAACCCACACCGCTTTGTCATGGATGATGCTCAAATGCATATCTACTTCCTGATAAAGAAGGATTCCTATCCGAGATACTTAAAATCAGATCTGTACAAGAACATGTTGGCCAGGGCGATCGTACcacaagaaacaaagaaaagTGTTTTTCCCTTCATGAGGAGGCAGCGCCACTCCAGCCCCAGCCCCGCCCTGGTGTCACATCCCACGGAGGATGATGGGAAAGCCAAGGCATCTCCTGCAGGGACCGTCTCACAGCTCTGTCGTTTTTCCAACCCCCTGGTCATGTTCTCAGCCTCCACCCTCCCCTCTGGAGAGAAATGGTCCCTGGTTGCAGCCTCCCCAAATCACACTGGAGTCCTCCCCACTCCAGCCTCCCCCTCTCCCAGCTGCGGCAGCTCCAAAAGCTCAGTGCAGCTCTGCTCGGGCACGTCTAGTCCCACAGCGAAGCTCTGA

Function

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018282 True 1593 mRNA 0.50 18 6688637 6704131

Neighbor

gene id symbol gene type direction distance location
AMCG00018279 usp7 coding upstream 71019 6599598 ~ 6617618 (+)
AMCG00018278 grin2a,LOC107690256,LOC107733867 coding upstream 323397 6339451 ~ 6365240 (+)
AMCG00018276 grin2a,LOC107685916,LOC108413991,LOC107690256 coding upstream 378794 6306395 ~ 6309843 (+)
AMCG00018277 grin2a,LOC107568390,LOC107690256,LOC107685916,LOC108413991 coding upstream 439097 6249124 ~ 6249540 (+)
AMCG00018275 NA coding upstream 469421 6216225 ~ 6219216 (+)
AMCG00018281 NA coding downstream 27479 6731610 ~ 6732494 (+)
AMCG00018295 NA coding downstream 81119 6785250 ~ 6790463 (+)
AMCG00018297 naa60 coding downstream 87923 6792054 ~ 6798225 (+)
AMCG00018296 carhsp1,LOC107733846,LOC107576530,LOC107590589 coding downstream 111303 6815434 ~ 6818771 (+)
AMCG00018294 NA coding downstream 123560 6827691 ~ 6828740 (+)
G115439 NA non-coding upstream 10284 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding upstream 21414 6658533 ~ 6667223 (+)
G115419 NA non-coding upstream 68540 6618178 ~ 6620097 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding upstream 100228 6525719 ~ 6588409 (+)
G115331 LOC100136012 non-coding upstream 642103 6046030 ~ 6046534 (+)
G115467 NA non-coding downstream 29576 6733707 ~ 6780046 (+)
G115481 NA non-coding downstream 68301 6772432 ~ 6773263 (+)
G115511 NA non-coding downstream 124957 6829088 ~ 6833312 (+)
G115514 NA non-coding downstream 133575 6837706 ~ 6838861 (+)
G115535 NA non-coding downstream 381443 7085574 ~ 7086966 (+)
AMCG00018272 NA other upstream 528021 6155488 ~ 6160616 (+)
G115299 NA other upstream 737620 5949463 ~ 5951017 (+)
G115049 NA other upstream 1924732 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 2084532 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 2495307 4186410 ~ 4193330 (+)
AMCG00018280 NA other downstream 6351 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 1189496 7893627 ~ 7894449 (+)
G115648 NA other downstream 1415647 8119778 ~ 8122171 (+)
G115789 NA other downstream 1989233 8693364 ~ 8694719 (+)
AMCG00018358 polr3k,rpc11 other downstream 2495526 9199657 ~ 9206776 (+)

Expression


Co-expression Network