AMCG00018286


Basic Information

Item Value
gene id AMCG00018286
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 6219973 ~ 6231007 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018286
GATTCAGTGTCTAATGATACCTGCCAGGTGTGAGTTGTAACTGAAGCCCGGTGTTATGATGTGCAAGACTGCTTTGTAGTTGCCTATAAAGCTTTACGTACGTTTTACTTGATTTGTTTAGGGTtcctaaataaagaaaaggctCGGGTGCGAGTTGGATAGAAAGCACGGAATAACAAGACGTTTCAGACATGGACGGCTCTGAAGGCCCGAGAAAGATTTGCAGAGCACGGAAGACCATGCCTGCGTCTAGTCGGGGACAACTTGATGTTCTCGGAAAGCCAACTAATCCaaatataaaatctgaaaaCGAGAGTATAGTCATCAGTAGCAATCAAAAACGCATGCACACGTTTACAGACGTATTTTGCCATTCTAATTGCAATAAATCTGCCCTGGAGCAAACTGCAGATGTGGGGTCTAGATCTGCAATGACATCTACTGGGATGGATGTGTCTTTCAAAGCTAAAACTGCATGTTCATCCCAGTTTTTAGGGCATCATTTAGATTCCCAAGTGCATGTCTGGTCAACCAACACTTTGGAAAGTTGTAAATCTGACCACAAGGCTCAGGCGTTTACCAAAGAAGCTGActtcaattataattttgtaagcACATCAGAAATGGAGAATGTGGTACCGATACTGGAGAGAATTGCAGCCAGTAGCCACCTGGGGAAAGTGATGATGAACAACAGAAGGACCATGAACGGctccacacacactgctttttCTGTGGACTGCAATACAGATACGCACAGCAAGGATGATGCTGTAATGACTAAAAGGAAAAGATGTCATTCAGAAAGTACGTCATGCAAGCGACCCAGAACTTCTCAAGCTGAGAATAAAGAGAGTACACTGGATCAAAGAATCTCCATTCAGATCCAGGAACTGATTAAGCAGGAAACCCTTGCTATGGTGAAACAGTCTGAGAATAAGATGCAGGAATTGTTGGAACGAATCCAGAGAGTAAACTGCAGTCACAAACATGAAATTATGGTCAACAACATGCAAGCACAAATTAACAAACTTAAGCGGAGGATTCAAGTTGTTCTGTCTTCAGTGACAAGGGTCAGACCTGAGGCCACCAAAGATCCCCCAGTTCTTGACAAGGTTGTACCTGATCCTTCCAATCCTGCCACACCTAAACCGCGTGACACCGCAGCATCTCCGCCCTGTGTCCTGGACTCCTCGGGATTGACCACGGACATCGTTCTGTCCATGCAGTCCCCGGCGAGCGACACGAGAACTTCGGAAGCTCAGAACGTTGCTGCAATGTCTAGCACATCGGCAGCTACAGCAAATCGTGATTCATCTTGCGAGCCCATATTGCGTAGTCGGTGTGTAGCAGACCCCAGACATTCAGTTGGCAGTACACCACCAGAACCAGTGCCAGCAAGTATCCCGGAAGTGACTGAGAAGCCCCAGGTCCGAAGTCAGaattcTGTGGACAGACAAGAGCCCGAAGCGCCTGTTCCCACAGACTTCGCTCCTGAAGCAGTTCCTTGTAAATCTTCTCAGTGTAATCAGGTAAAAGTCTGCCAGAAGCGCCATGTGGTTTTGGTGTGGAACGCAATGTGGCACAACCGATACCAGCTCAGAATGCTGTATGCCCAGAAAATACTGCATCCTCTTGTACCAAGACTGTCCAGTCAATACATCAGCCTGTTAAAGATGCCATCTGCAGTGCTCCCAAGGgatCCTAAATTTCCCCCTCTTCCTGCGACTTCATTTCCACCTAATCTCCCACCTATAGCTGCCACCACTAATCTGCCTCAGAAGCTGGAGCTCAAAGTGGCTAGAATCAAAAACCCCAAAGGAATTGGCATCCTGTGGAATGTGGCGCAGATGGACCCCAACGCCGCGCCGATGCACAGCTATTATCTGTACGTGCTGTACGAGAACTTCAATGGCTGCGTGTCGAAGTGGAAGAACATCGGCATCATTGCAGCCCTTCCGCTGCCGATGGCTTGTAAGCTCACGCAGTTTGCCTCGGGAAGGAGATACTGTTTTGCAATTGTAGGAAAGGACATTTACGGGCGATACGGACCCTACAGTGAAATCCAGTCGGTCAGTGCTCATGAGCCATGAACACGGTCATAATTTGCGTCCGTTACAATTGTGTTCTGTAATTGTGAATATTGGTTTTATATGGTAAAAATTCAAACTTTTGAGGTTCTCTCTCTTCAAAACCCTTCTTCCTAGAGGAGCTATAGAATTGTGAAGGGTGTACTTTTTGTAAgcttatttatacatgtttttcttacTACTTTTACTTcagatgttttgttatttaaactgATTTACATGTAGATTGTTCATGAATAGCgacaaaatgaaaaactctTTAGTTCCTTGTTGTTGGCCTGAGCCAAACTTCTGAAGATAAATTCTTCACTTGGTGGCAGACTCCTAAATGGttaattctgtattttgctGAAACCTATTAAAAAGATGGAGTACTGTATACAGTTTTTCCCCACTGTGTGATTCAGTACCCAATTATACAGCTAGGcgtttacatttcaattaagtgTGAGCAGTCTTATTTTCCCAATCACCTTTGACCCTTCCagtctgttttgttctttctaGTAAGTTTAAAAGTATCCTTTTATATTGAAGTTTGTTCTACTGTAACgcaaaatcattaaaagtttGTTACATGTGTATTTTGCTTAGCAACGGTTACGCTGCTCAAATGAgatgcaaaatgtgtttattttgatttgcagACTGACCTGATCTGTTCATAGTGCTCTTTGAGCGGAAACTGTAGAAGTTAGTTTATCCTCCTCTGTGGGCTGctgttacttttatttattgggATCCTCCTTGTGGCTTTTGTGATGAATGGGTATAATTTATGTACCTTTTTGGCTGCTGTCATTTGGCATCAACTCTGATTCTAGACTGGAATTGGTCGACGGCAGAGACCTGGTGTCAGTTCATTGGCATTTCTGAGCTGTATCCATTCTCTAGAAGAAGACCTATGTAGCTGGTTGGTCCACAAGACCTTTGTTGTGGAAGTCAAGACAATGTAACCACATACTCTACCACCTGATCCAATGGGTGGTCCATGAGATTCAACCCCGTATCCATTTGCTCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018286 True 3114 mRNA 0.44 12 6219973 6231007

Neighbor

gene id symbol gene type direction distance location
AMCG00018292 nubp1,LOC107690260,LOC107590599 coding downstream 37161 6158280 ~ 6182812 (-)
AMCG00018289 NA coding downstream 64182 6128713 ~ 6155791 (-)
AMCG00018274 clec16a coding downstream 95141 6068303 ~ 6124832 (-)
AMCG00018263 NA coding downstream 333973 5881546 ~ 5886000 (-)
AMCG00018265 NA coding downstream 411130 5794517 ~ 5808843 (-)
AMCG00018293 grin2a,LOC107685916,LOC107690256,LOC107568390 coding upstream 78362 6309369 ~ 6464857 (-)
AMCG00018283 c2h16orf72,zgc:77849,LOC105900007,LOC107590581,LOC107738628,LOC107685917 coding upstream 353969 6584976 ~ 6593102 (-)
AMCG00018284 arhgdib,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding upstream 422882 6653889 ~ 6675207 (-)
AMCG00018287 NA coding upstream 485877 6716884 ~ 6729381 (-)
AMCG00018288 clcn7,LOC106594444 coding upstream 506578 6737585 ~ 6754642 (-)
G115395 NA non-coding downstream 757 6217528 ~ 6219216 (-)
G115332 LOC100136012 non-coding downstream 173355 6046030 ~ 6046618 (-)
G115279 NA non-coding downstream 465951 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 469930 5749783 ~ 5750043 (-)
G115277 NA non-coding downstream 471614 5747458 ~ 5748359 (-)
G115534 NA non-coding upstream 770795 7001802 ~ 7002005 (-)
G115577 NA non-coding upstream 1503090 7734097 ~ 7734384 (-)
G115579 NA non-coding upstream 1510967 7741974 ~ 7742210 (-)
G115580 NA non-coding upstream 1511534 7742541 ~ 7742747 (-)
G115596 NA non-coding upstream 1611330 7842337 ~ 7842708 (-)
G115320 NA other downstream 268918 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 853219 5356846 ~ 5366754 (-)
G115183 NA other downstream 915544 5300107 ~ 5304429 (-)
G115174 NA other downstream 932100 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 1568332 4646147 ~ 4651641 (-)
AMCG00018291 NA other upstream 379626 6610633 ~ 6652773 (-)
G115581 NA other upstream 1512211 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 2410889 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 2435730 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 3008805 9239812 ~ 9258202 (-)

Expression


Co-expression Network