AMCG00018304


Basic Information

Item Value
gene id AMCG00018304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 6866912 ~ 6876178 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018304
ATGAGCTCAGTGTGCATCTTGGGAAATGAAGCGGTCGGTTGCGTTCCGTCAAGAGAGGATGACAGCTCTTGCGTTGACGTGCCCAAAGAGGAAGAGGACGGAgtgaaggaggaagaggagagggagcagCGAGAAGTTCTTCAATCCCTTTTGGATGAAGACGGGGACCTGGATGTGCTGAGGAAACCTAAAGACCACTTCAGGACAGAGGAAGATGTAACGGAGAGGGACAGAGTGTATCCCATCATTCTGAGTAAAGGAGAGAGGGTGGTCAGCGAGGATGAAGAGGACGAGAGTGCCACCAATGTCATTAAAATTGAGCACACAATGGCCACCCCATTAGAAGATGTTGGTAAGCAGGTATGGCGTGGGGCTATGCTTATGGCTGACTACATTCTCTCTCATCAACAACTGTTCAGGGGATGCACTGTCCTAGAACTCGGGGCAGGCACTGGAATGACAAGTATTGTCATGGCAAGCGTTGCCAAGAAAGTTTTCTGcacagATGTTGGCCACGACCTGCTGAGCATGTGTGAGAGGAATGTGGAATTAAATCGGCACATACTGGAGCCAGCAGGAGGGGATCTCAAGGTGTGTGAGTTGGACTGGCTAGGGAATGACTTCTGCACTGATCCCAACACAGAATTCAGCTGGACAGAGGATGAAGTGGCGGATCTACACAATAATGCCACCGTGCTGATCGCTGCTGACGTCTGCTATGATGATGACCTCACAGATGGCTTATTCAGGACCCTGTACAGAATCACAAGCAATCTCCGGAACCCcagcactgtttatttttccattgagaAAAGGCTGAATTTCACACTGAGACATATGGATATATCGTGTGAAGCATACGATCACTTCCGCTCCTGTCTGGAGGACTTGAGGAATATCACAGATGGCAAGATGCGGTTCACTTTGGAGACCGTTCAGCCCACCTTCCCCCAGTTCTTCACCTACGAGCGCATCGAACAGCTGGTGAGTTTGGTCCATCTGGAGGCCAGTCTGCCATCGGTGCTTAAAGCCAGCCTGCTCGGCCGCCGTGCCCTGTTCACACCGCTAACTGGCAGAGACGCTGTGACCGCTGTGCCAGACCGGCTCCTGTCAACCCAGCAGCATCACATCCCG

Function

GO: NA

KEGG:

id description
K23040 METTL22; methyltransferase-like protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018304 True 1134 mRNA 0.52 10 6866912 6876178

Neighbor

gene id symbol gene type direction distance location
AMCG00018301 NA coding downstream 16118 6827619 ~ 6850794 (-)
AMCG00018299 NA coding downstream 40689 6821595 ~ 6826223 (-)
AMCG00018298 NA coding downstream 83329 6780771 ~ 6783583 (-)
AMCG00018290 NA coding downstream 89474 6776337 ~ 6777438 (-)
AMCG00018285 NA coding downstream 102833 6759984 ~ 6764079 (-)
AMCG00018302 LOC107568067,LOC107685930,LOC107733849 coding upstream 257720 7133898 ~ 7136847 (-)
AMCG00018303 rbfox1,LOC107568067 coding upstream 276913 7153091 ~ 7160634 (-)
AMCG00018307 NA coding upstream 845086 7721264 ~ 7743678 (-)
AMCG00018306 NA coding upstream 868918 7745096 ~ 7763759 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding upstream 1007029 7883207 ~ 7894569 (-)
G115395 NA non-coding downstream 647696 6217528 ~ 6219216 (-)
G115332 LOC100136012 non-coding downstream 820294 6046030 ~ 6046618 (-)
G115279 NA non-coding downstream 1112890 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 1116869 5749783 ~ 5750043 (-)
G115277 NA non-coding downstream 1118553 5747458 ~ 5748359 (-)
G115534 NA non-coding upstream 125624 7001802 ~ 7002005 (-)
G115577 NA non-coding upstream 857919 7734097 ~ 7734384 (-)
G115579 NA non-coding upstream 865796 7741974 ~ 7742210 (-)
G115580 NA non-coding upstream 866363 7742541 ~ 7742747 (-)
G115596 NA non-coding upstream 966159 7842337 ~ 7842708 (-)
AMCG00018291 NA other downstream 214139 6610633 ~ 6652773 (-)
G115320 NA other downstream 915857 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 1500158 5356846 ~ 5366754 (-)
G115183 NA other downstream 1562483 5300107 ~ 5304429 (-)
G115174 NA other downstream 1579039 5286386 ~ 5287873 (-)
G115581 NA other upstream 867040 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 1765718 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 1790559 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 2363634 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 2898128 9774306 ~ 9779545 (-)

Expression


Co-expression Network