AMCG00018307


Basic Information

Item Value
gene id AMCG00018307
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7721264 ~ 7743678 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018307
ATGCAGCTTGGCCACCGACCGGACCGAACACTGCGTATTCCTGGACCCCCTGGGCAGCATAAGGGGCAACATCACCTCGAGGTTTATATCCCCGATGACGATAATGGGCTGGATCCGCTCATGTTTGGCCAAATGGAAGTTCTCCGGGAGCTCTGCCTTCTTGTAGACCTGGAGGTGTGGATGAGCATTCTTCAGGGCCAGGTACACCTGCTCCTCCATGCCGGCCTTGGGTGTGATCATGCCAAAGCCCCCGTAGTCCAGAATGTCAAAGTGGACCAGTTTGATGAAGTTCATGTAGTTGGACAGCTTGATCTCTTCCACAGCCGGCGCCTTCTTGATGGTAGTCATGCCGTGGTCGGAGGTGATGATGAGGTTGAGACGGTCAATCAGGTTGTGGCGCCGTATGGCCTCCAGCAGGAAGCCGATGGTCCTGTCGATCTGCCGGATGATCGCACGCCGGTCCTCCGTCTCCGGACCCTTTGCGTGCCCCACCGCGTCCGGCTCCCCGTAGTAGAGTGTGACGAAGTCAAAGTCCTCCTTGGTGAACCAGCCCATGACTGTGTCAATGTTCTCCCGCCACTCCATCTCATTAGAGTCGGGGTGCGAGTGAGACTCGACCAGGGCCCTGTTGACTGTCTGGCCGCTGAAGTTGGCTCCCCCTCCAGGATAGAATGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018307 True 675 mRNA 0.57 4 7721264 7743678

Neighbor

gene id symbol gene type direction distance location
AMCG00018303 rbfox1,LOC107568067 coding downstream 560630 7153091 ~ 7160634 (-)
AMCG00018302 LOC107568067,LOC107685930,LOC107733849 coding downstream 584417 7133898 ~ 7136847 (-)
AMCG00018304 NA coding downstream 845086 6866912 ~ 6876178 (-)
AMCG00018301 NA coding downstream 870470 6827619 ~ 6850794 (-)
AMCG00018299 NA coding downstream 895041 6821595 ~ 6826223 (-)
AMCG00018306 NA coding upstream 1418 7745096 ~ 7763759 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding upstream 139529 7883207 ~ 7894569 (-)
AMCG00018311 gsg1l,LOC107738642,LOC107690243,LOC107685933,LOC103366699 coding upstream 200439 7944117 ~ 7972869 (-)
AMCG00018314 NA coding upstream 296832 8040510 ~ 8045893 (-)
AMCG00018315 NA coding upstream 324523 8068201 ~ 8073947 (-)
G115534 NA non-coding downstream 719259 7001802 ~ 7002005 (-)
G115395 NA non-coding downstream 1502048 6217528 ~ 6219216 (-)
G115332 LOC100136012 non-coding downstream 1674646 6046030 ~ 6046618 (-)
G115279 NA non-coding downstream 1967242 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 1971221 5749783 ~ 5750043 (-)
G115596 NA non-coding upstream 98659 7842337 ~ 7842708 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding upstream 116638 7860316 ~ 7868626 (-)
G115732 NA non-coding upstream 686448 8430126 ~ 8433570 (-)
G115807 NA non-coding upstream 773656 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 1118195 8861873 ~ 8862377 (-)
AMCG00018291 NA other downstream 1068491 6610633 ~ 6652773 (-)
G115320 NA other downstream 1770209 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 2354510 5356846 ~ 5366754 (-)
G115183 NA other downstream 2416835 5300107 ~ 5304429 (-)
G115174 NA other downstream 2433391 5286386 ~ 5287873 (-)
AMCG00018344 NA other upstream 898218 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 923059 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 1496134 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 2030628 9774306 ~ 9779545 (-)
G116165 NA other upstream 2175368 9919046 ~ 9924582 (-)

Expression


Co-expression Network